4l6u
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4l6u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4L6U FirstGlance]. <br> | <table><tr><td colspan='2'>[[4l6u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4L6U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4L6U FirstGlance]. <br> | ||
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4l6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l6u OCA], [https://pdbe.org/4l6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4l6u RCSB], [https://www.ebi.ac.uk/pdbsum/4l6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4l6u ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4l6u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4l6u OCA], [https://pdbe.org/4l6u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4l6u RCSB], [https://www.ebi.ac.uk/pdbsum/4l6u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4l6u ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
[https://www.uniprot.org/uniprot/O28411_ARCFU O28411_ARCFU] | [https://www.uniprot.org/uniprot/O28411_ARCFU O28411_ARCFU] | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | A multi-subunit ribonucleoprotein complex termed the Cmr RNA-silencing complex recognizes and destroys viral RNA in the CRISPR-mediated immune defence mechanism in many prokaryotes using an as yet unclear mechanism. In Archaeoglobus fulgidus, this complex consists of six subunits, Cmr1-Cmr6. Here, the crystal structure of Cmr1 from A. fulgidus is reported, revealing that the protein is composed of two tightly associated ferredoxin-like domains. The domain located at the N-terminus is structurally most similar to the N-terminal ferredoxin-like domain of the CRISPR RNA-processing enzyme Cas6 from Pyrococcus furiosus. An ensuing mutational analysis identified a highly conserved basic surface patch that binds single-stranded nucleic acids specifically, including the mature CRISPR RNA, but in a sequence-independent manner. In addition, this subunit was found to cleave single-stranded RNA. Together, these studies elucidate the structure and the catalytic activity of the Cmr1 subunit. | ||
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- | Crystal structure and CRISPR RNA-binding site of the Cmr1 subunit of the Cmr interference complex.,Sun J, Jeon JH, Shin M, Shin HC, Oh BH, Kim JS Acta Crystallogr D Biol Crystallogr. 2014 Feb;70(Pt 2):535-43. doi:, 10.1107/S1399004713030290. Epub 2014 Jan 31. PMID:24531487<ref>PMID:24531487</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 4l6u" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> |
Current revision
Crystal structure of AF1868: Cmr1 subunit of the Cmr RNA silencing complex
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