4r9i

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Current revision (08:59, 20 March 2024) (edit) (undo)
 
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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4r9i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R9I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R9I FirstGlance]. <br>
<table><tr><td colspan='2'>[[4r9i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bombyx_mori Bombyx mori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4R9I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4R9I FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r9i OCA], [https://pdbe.org/4r9i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r9i RCSB], [https://www.ebi.ac.uk/pdbsum/4r9i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r9i ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4r9i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4r9i OCA], [https://pdbe.org/4r9i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4r9i RCSB], [https://www.ebi.ac.uk/pdbsum/4r9i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4r9i ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[https://www.uniprot.org/uniprot/C0J8G7_BOMMO C0J8G7_BOMMO]
[https://www.uniprot.org/uniprot/C0J8G7_BOMMO C0J8G7_BOMMO]
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Serpins generally serve as inhibitors that utilize a mobile reactive center loop (RCL) as bait to trap protease targets. Here, we present the crystal structure of serpin18 from Bombyx mori at 1.65 A resolution, which has a very short and stable RCL. Activity analysis showed that the inhibitory target of serpin18 is a cysteine protease rather than a serine protease. Notably, this inhibitiory reaction results from the formation of an intermediate complex, which then follows for the digestion of protease and inhibitor into small fragments. This activity differs from previously reported modes of inhibition for serpins. Our findings have thus provided novel structural insights into the unique inhibitory mechanism of serpin18. Furthermore, one physiological target of serpin18, fibroinase, was identified, which enables us to better define the potential role for serpin18 in regulating fibroinase activity during B. mori development.
 
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Structural insights into the unique inhibitory mechanism of the silkworm protease inhibitor serpin18.,Guo PC, Dong Z, Zhao P, Zhang Y, He H, Tan X, Zhang W, Xia Q Sci Rep. 2015 Jul 7;5:11863. doi: 10.1038/srep11863. PMID:26148664<ref>PMID:26148664</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 4r9i" style="background-color:#fffaf0;"></div>
 
==See Also==
==See Also==
*[[Serpin 3D structures|Serpin 3D structures]]
*[[Serpin 3D structures|Serpin 3D structures]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>

Current revision

Crystal structure of cysteine proteinase inhibitor Serpin18 from Bombyx mori

PDB ID 4r9i

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