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1rc7

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[[Image:1rc7.gif|left|200px]]
[[Image:1rc7.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1rc7 |SIZE=350|CAPTION= <scene name='initialview01'>1rc7</scene>, resolution 2.15&Aring;
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The line below this paragraph, containing "STRUCTURE_1rc7", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=C:CYTIDINE-5&#39;-MONOPHOSPHATE'>C</scene>, <scene name='pdbligand=G:GUANOSINE-5&#39;-MONOPHOSPHATE'>G</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Ribonuclease_III Ribonuclease III], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.26.3 3.1.26.3] </span>
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or leave the SCENE parameter empty for the default display.
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|GENE= RNC, AQ_946 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=63363 Aquifex aeolicus])
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|DOMAIN=
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{{STRUCTURE_1rc7| PDB=1rc7 | SCENE= }}
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|RELATEDENTRY=[[1i4s|1I4S]], [[1jfz|1JFZ]], [[1o0w|1O0W]], [[1rc5|1RC5]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rc7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rc7 OCA], [http://www.ebi.ac.uk/pdbsum/1rc7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rc7 RCSB]</span>
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}}
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'''Crystal structure of RNase III Mutant E110K from Aquifex Aeolicus complexed with ds-RNA at 2.15 Angstrom Resolution'''
'''Crystal structure of RNase III Mutant E110K from Aquifex Aeolicus complexed with ds-RNA at 2.15 Angstrom Resolution'''
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[[Category: Gan, J.]]
[[Category: Gan, J.]]
[[Category: Ji, X.]]
[[Category: Ji, X.]]
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[[Category: ds-rna]]
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[[Category: Ds-rna]]
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[[Category: endonucleolytic cleavage]]
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[[Category: Endonucleolytic cleavage]]
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[[Category: ribonuclease iii]]
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[[Category: Ribonuclease iii]]
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[[Category: rna interference]]
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[[Category: Rna interference]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:19:26 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:26:10 2008''
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Revision as of 04:19, 3 May 2008

Template:STRUCTURE 1rc7

Crystal structure of RNase III Mutant E110K from Aquifex Aeolicus complexed with ds-RNA at 2.15 Angstrom Resolution


Overview

Ribonuclease III (RNase III) represents a family of double-stranded RNA (dsRNA) endonucleases. The simplest bacterial enzyme contains an endonuclease domain (endoND) and a dsRNA binding domain (dsRBD). RNase III can affect RNA structure and gene expression in either of two ways: as a dsRNA-processing enzyme that cleaves dsRNA, or as a dsRNA binding protein that binds but does not cleave dsRNA. We previously determined the endoND structure of Aquifex aeolicus RNase III (Aa-RNase III) and modeled a catalytic complex of full-length Aa-RNase III with dsRNA. Here, we present the crystal structure of Aa-RNase III in complex with dsRNA, revealing a noncatalytic assembly. The major differences between the two functional forms of RNase III.dsRNA are the conformation of the protein and the orientation and location of dsRNA. The flexibility of a 7 residue linker between the endoND and dsRBD enables the transition between these two forms.

About this Structure

1RC7 is a Single protein structure of sequence from Aquifex aeolicus. Full crystallographic information is available from OCA.

Reference

Noncatalytic assembly of ribonuclease III with double-stranded RNA., Blaszczyk J, Gan J, Tropea JE, Court DL, Waugh DS, Ji X, Structure. 2004 Mar;12(3):457-66. PMID:15016361 Page seeded by OCA on Sat May 3 07:19:26 2008

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