6kmo

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Current revision (10:43, 27 March 2024) (edit) (undo)
 
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<StructureSection load='6kmo' size='340' side='right'caption='[[6kmo]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
<StructureSection load='6kmo' size='340' side='right'caption='[[6kmo]], [[Resolution|resolution]] 1.45&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6kmo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_35953 Atcc 35953]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KMO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6KMO FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6kmo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacter_asburiae Enterobacter asburiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KMO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6KMO FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AN689_0218030 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=61645 ATCC 35953])</td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6kmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kmo OCA], [http://pdbe.org/6kmo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6kmo RCSB], [http://www.ebi.ac.uk/pdbsum/6kmo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6kmo ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6kmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6kmo OCA], [https://pdbe.org/6kmo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6kmo RCSB], [https://www.ebi.ac.uk/pdbsum/6kmo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6kmo ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Lipases are widely present in various plants, animals and microorganisms, constituting a large category of enzymes. They have the ability to catalyze the cleavage of ester bonds. The lipase CinB from Enterobacter asburiae (E. asburiae) is an acetyl esterase. The primary amino acid sequence suggests that the EaCinB protein belongs to the alpha/beta-hydrolase (ABH) superfamily of the esterase/lipase superfamily. However, its molecular functions have not yet been determined. Here, we report the crystal structure of E. asburiae CinB at a 1.45A resolution. EaCinB contains a signal peptide, cap domain and catalytic domain. The active site of EaCinB contains the catalytic triad (Ser180-His307-Asp277) on the catalytic domain. The oxyanion hole is composed of Gly106 and Gly107 within the conserved sequence motif HGGG (amino acid residues 106-109). The substrate is accessible between the alpha1 and alpha2 helices or the alpha1 helix and catalytic domain. Narrow substrate pockets are formed by the alpha2 helix of the cap domain. Site-directed mutagenesis showed that EaCinB-W208H exhibits a higher catalytic ability than EaCinB-WT by approximately nine times. Our results provide insight into the molecular function of EaCinB.
 
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Structural and functional analyses of the lipase CinB from Enterobacter asburiae.,Shang F, Lan J, Liu W, Chen Y, Wang L, Zhao J, Chen J, Gao P, Ha NC, Quan C, Nam KH, Xu Y Biochem Biophys Res Commun. 2019 Nov 5;519(2):274-279. doi:, 10.1016/j.bbrc.2019.08.166. Epub 2019 Sep 5. PMID:31493870<ref>PMID:31493870</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 6kmo" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 35953]]
 
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[[Category: Large Structures]]
 
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[[Category: Shang, F]]
 
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[[Category: Xu, Y]]
 
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[[Category: Cinb]]
 
[[Category: Enterobacter asburiae]]
[[Category: Enterobacter asburiae]]
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[[Category: Esterase]]
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[[Category: Large Structures]]
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[[Category: Hydrolase]]
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[[Category: Shang F]]
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[[Category: Xu Y]]

Current revision

Crystal structure of a novel esterase CinB from Enterobacter asburiae

PDB ID 6kmo

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