6m5u
From Proteopedia
(Difference between revisions)
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| - | ==== | + | ==The coordinates of the monomeric terminase complex in the presence of the ADP-BeF3== |
| - | <StructureSection load='6m5u' size='340' side='right'caption='[[6m5u]]' scene=''> | + | <StructureSection load='6m5u' size='340' side='right'caption='[[6m5u]], [[Resolution|resolution]] 3.80Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [ | + | <table><tr><td colspan='2'>[[6m5u]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_alphaherpesvirus_1_strain_17 Human alphaherpesvirus 1 strain 17]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6M5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6M5U FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.8Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=BEF:BERYLLIUM+TRIFLUORIDE+ION'>BEF</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6m5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6m5u OCA], [https://pdbe.org/6m5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6m5u RCSB], [https://www.ebi.ac.uk/pdbsum/6m5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6m5u ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/TRM3_HHV11 TRM3_HHV11] Component of the molecular motor that translocates genomic DNA in empty capsid during DNA packaging. Heterodimerizes with small terminase protein to be docked on capsid portal protein. The latter forms a ring in which genomic DNA in translocated into the capsid. May have or induce an endonuclease activity to cleave the genome concatemer after encapsidation. | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Terminase 3D Structures|Terminase 3D Structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Human alphaherpesvirus 1 strain 17]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Rao ZH]] |
| + | [[Category: Wang N]] | ||
| + | [[Category: Wang XX]] | ||
| + | [[Category: Yang P]] | ||
| + | [[Category: Yang YX]] | ||
| + | [[Category: Zhou ZH]] | ||
| + | [[Category: Zhu L]] | ||
Revision as of 10:48, 27 March 2024
The coordinates of the monomeric terminase complex in the presence of the ADP-BeF3
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Categories: Human alphaherpesvirus 1 strain 17 | Large Structures | Rao ZH | Wang N | Wang XX | Yang P | Yang YX | Zhou ZH | Zhu L
