1g6o
From Proteopedia
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<StructureSection load='1g6o' size='340' side='right'caption='[[1g6o]], [[Resolution|resolution]] 2.50Å' scene=''> | <StructureSection load='1g6o' size='340' side='right'caption='[[1g6o]], [[Resolution|resolution]] 2.50Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1g6o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1g6o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G6O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G6O FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g6o OCA], [https://pdbe.org/1g6o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g6o RCSB], [https://www.ebi.ac.uk/pdbsum/1g6o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g6o ProSAT], [https://www.topsan.org/Proteins/MCSG/1g6o TOPSAN]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g6o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g6o OCA], [https://pdbe.org/1g6o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g6o RCSB], [https://www.ebi.ac.uk/pdbsum/1g6o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g6o ProSAT], [https://www.topsan.org/Proteins/MCSG/1g6o TOPSAN]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q7BK04_HELPX Q7BK04_HELPX] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g6o ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g6o ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | The type IV secretion system of Helicobacter pylori consists of 10--15 proteins responsible for transport of the transforming protein CagA into target epithelial cells. Secretion of CagA crucially depends on the hexameric ATPase, HP0525, a member of the VirB11-PulE family. We present the crystal structure of a binary complex of HP0525 bound to ADP. Each monomer consists of two domains formed by the N- and C-terminal halves of the sequence. ADP is bound at the interface between the two domains. In the hexamer, the N- and C-terminal domains form two rings, which together form a chamber open on one side and closed on the other. A model is proposed in which HP0525 functions as an inner membrane pore, the closure and opening of which is regulated by ATP binding and ADP release. | ||
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| - | Crystal structure of the hexameric traffic ATPase of the Helicobacter pylori type IV secretion system.,Yeo HJ, Savvides SN, Herr AB, Lanka E, Waksman G Mol Cell. 2000 Dec;6(6):1461-72. PMID:11163218<ref>PMID:11163218</ref> | ||
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 1g6o" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Helicobacter pylori]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Herr | + | [[Category: Herr AB]] |
| - | [[Category: Lanka | + | [[Category: Lanka E]] |
| - | + | [[Category: Savvides SN]] | |
| - | [[Category: Savvides | + | [[Category: Waksman G]] |
| - | [[Category: Waksman | + | [[Category: Yeo HJ]] |
| - | [[Category: Yeo | + | |
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Revision as of 11:19, 27 March 2024
CRYSTAL STRUCTURE OF THE HELICOBACTER PYLORI ATPASE, HP0525, IN COMPLEX WITH ADP
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