1hfj
From Proteopedia
(Difference between revisions)
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<StructureSection load='1hfj' size='340' side='right'caption='[[1hfj]], [[Resolution|resolution]] 2.40Å' scene=''> | <StructureSection load='1hfj' size='340' side='right'caption='[[1hfj]], [[Resolution|resolution]] 2.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1hfj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1hfj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Dickeya_chrysanthemi Dickeya chrysanthemi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HFJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HFJ FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hfj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hfj OCA], [https://pdbe.org/1hfj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hfj RCSB], [https://www.ebi.ac.uk/pdbsum/1hfj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hfj ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hfj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hfj OCA], [https://pdbe.org/1hfj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hfj RCSB], [https://www.ebi.ac.uk/pdbsum/1hfj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hfj ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ASPG_DICCH ASPG_DICCH] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hfj ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hfj ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | Quasi-enantiomorphic crystals of the Y25F mutant of Escherichia coli L-asparaginase and of the native Erwinia chrysanthemi L-asparaginase were obtained in the hexagonal space groups P6(5)22 and P6(1)22, respectively. The structures of these highly homologous enzymes were solved by molecular replacement and were refined with data extending to 2.2-2.5 A. These structures were compared with each other, as well as with other L-asparaginase structures previously observed with different crystal packing. It is concluded that the observed phenomenon, which is rare, was most likely to have arisen by chance. | ||
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| - | Structures of two highly homologous bacterial L-asparaginases: a case of enantiomorphic space groups.,Jaskolski M, Kozak M, Lubkowski J, Palm G, Wlodawer A Acta Crystallogr D Biol Crystallogr. 2001 Mar;57(Pt 3):369-77. PMID:11223513<ref>PMID:11223513</ref> | ||
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 1hfj" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Asparaginase 3D structures|Asparaginase 3D structures]] | *[[Asparaginase 3D structures|Asparaginase 3D structures]] | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Dickeya chrysanthemi]] |
| - | + | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Jaskolski | + | [[Category: Jaskolski M]] |
| - | [[Category: Kozak | + | [[Category: Kozak M]] |
| - | [[Category: Lubkowski | + | [[Category: Lubkowski J]] |
| - | [[Category: Palm | + | [[Category: Palm GJ]] |
| - | [[Category: Wlodawer | + | [[Category: Wlodawer A]] |
| - | + | ||
Current revision
Asparaginase from Erwinia chrysanthemi, hexagonal form with sulfate
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