3fza

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Current revision (06:37, 3 April 2024) (edit) (undo)
 
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<StructureSection load='3fza' size='340' side='right'caption='[[3fza]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='3fza' size='340' side='right'caption='[[3fza]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[3fza]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hybrid_aspen Hybrid aspen]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FZA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FZA FirstGlance]. <br>
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<table><tr><td colspan='2'>[[3fza]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_tremula_x_Populus_tremuloides Populus tremula x Populus tremuloides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FZA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FZA FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3fz9|3fz9]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GrxS12 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=47664 Hybrid aspen])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fza FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fza OCA], [https://pdbe.org/3fza PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fza RCSB], [https://www.ebi.ac.uk/pdbsum/3fza PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fza ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fza FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fza OCA], [https://pdbe.org/3fza PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fza RCSB], [https://www.ebi.ac.uk/pdbsum/3fza PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fza ProSAT]</span></td></tr>
</table>
</table>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fza ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fza ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Glutaredoxins (Grxs) are efficient catalysts for the reduction of mixed disulfides in glutathionylated proteins, using glutathione or thioredoxin reductases for their regeneration. Using GFP fusion, we have shown that poplar GrxS12, which possesses a monothiol (28)WCSYS(32) active site, is localized in chloroplasts. In the presence of reduced glutathione, the recombinant protein is able to reduce in vitro substrates, such as hydroxyethyldisulfide and dehydroascorbate, and to regenerate the glutathionylated glyceraldehyde-3-phosphate dehydrogenase. Although the protein possesses two conserved cysteines, it is functioning through a monothiol mechanism, the conserved C terminus cysteine (Cys(87)) being dispensable, since the C87S variant is fully active in all activity assays. Biochemical and crystallographic studies revealed that Cys(87) exhibits a certain reactivity, since its pK(a) is around 5.6. Coupled with thiol titration, fluorescence, and mass spectrometry analyses, the resolution of poplar GrxS12 x-ray crystal structure shows that the only oxidation state is a glutathionylated derivative of the active site cysteine (Cys(29)) and that the enzyme does not form inter- or intramolecular disulfides. Contrary to some plant Grxs, GrxS12 does not incorporate an iron-sulfur cluster in its wild-type form, but when the active site is mutated into YCSYS, it binds a [2Fe-2S] cluster, indicating that the single Trp residue prevents this incorporation.
 
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Structure-function relationship of the chloroplastic glutaredoxin S12 with an atypical WCSYS active site.,Couturier J, Koh CS, Zaffagnini M, Winger AM, Gualberto JM, Corbier C, Decottignies P, Jacquot JP, Lemaire SD, Didierjean C, Rouhier N J Biol Chem. 2009 Apr 3;284(14):9299-310. Epub 2009 Jan 21. PMID:19158074<ref>PMID:19158074</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 3fza" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Hybrid aspen]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Corbier, C]]
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[[Category: Populus tremula x Populus tremuloides]]
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[[Category: Didierjean, C]]
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[[Category: Corbier C]]
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[[Category: Jacquot, J P]]
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[[Category: Didierjean C]]
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[[Category: Koh, C S]]
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[[Category: Jacquot JP]]
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[[Category: Rouhier, N]]
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[[Category: Koh CS]]
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[[Category: Glutaredoxin]]
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[[Category: Rouhier N]]
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[[Category: Oxidoreductase]]
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Current revision

Crystal structure of poplar glutaredoxin S12 in complex with glutathione and beta-mercaptoethanol

PDB ID 3fza

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