1k19

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:56, 3 April 2024) (edit) (undo)
 
Line 1: Line 1:
==NMR Solution Structure of the Chemosensory Protein CSP2 from Moth Mamestra brassicae==
==NMR Solution Structure of the Chemosensory Protein CSP2 from Moth Mamestra brassicae==
-
<StructureSection load='1k19' size='340' side='right'caption='[[1k19]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='1k19' size='340' side='right'caption='[[1k19]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1k19]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cabbage_moth Cabbage moth]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K19 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K19 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1k19]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mamestra_brassicae Mamestra brassicae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K19 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K19 FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k19 OCA], [https://pdbe.org/1k19 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k19 RCSB], [https://www.ebi.ac.uk/pdbsum/1k19 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k19 ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k19 OCA], [https://pdbe.org/1k19 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k19 RCSB], [https://www.ebi.ac.uk/pdbsum/1k19 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k19 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9NG96_MAMBR Q9NG96_MAMBR]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 16: Line 19:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k19 ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k19 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Chemosensory proteins (CSPs) are believed to be involved in chemical communication and perception. A number of such proteins, of molecular mass approximately 13 kDa, have been isolated from different sensory organs of a wide range of insect species. Several CSPs have been identified in the antennae and proboscis of the moth Mamestra brassicae. CSPMbraA6, a 112-amino-acid antennal protein, has been expressed in a soluble form in large quantities in the Escherichi coli periplasm. NMR structure determination of CSPMbraA6 has been performed with 1H- and 15N-labelled samples. The calculated structures present an average root mean square deviation about the mean structure of 0.63 A for backbone atoms and 1.27 A for all non-hydrogen atoms except the 12 N-terminal residues. The protein is well folded from residue 12 to residue 110, and consists of a non-bundle alpha-helical structure with six helices connected by alpha alpha loops. It has a globular shape, with overall dimensions of 32 A x 28 A x 24 A. A channel is visible in the hydrophobic core, with dimensions of 3 A x 9 A x 21 A. In some of the 20 solution structures calculated, this channel is closed either by Trp-94 at one end or by Tyr-26 at the other end; in some other solutions, this channel is closed at both ends. Binding experiments with 12-bromododecanol indicate that the CSPMbraA6 structure is modified upon ligand binding.
 
- 
-
Solution structure of a chemosensory protein from the moth Mamestra brassicae.,Mosbah A, Campanacci V, Lartigue A, Tegoni M, Cambillau C, Darbon H Biochem J. 2003 Jan 1;369(Pt 1):39-44. PMID:12217077<ref>PMID:12217077</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 1k19" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Cabbage moth]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Cambillau, C]]
+
[[Category: Mamestra brassicae]]
-
[[Category: Campanacci, V]]
+
[[Category: Cambillau C]]
-
[[Category: Darbon, H]]
+
[[Category: Campanacci V]]
-
[[Category: Lartigue, A]]
+
[[Category: Darbon H]]
-
[[Category: Mosbah, A]]
+
[[Category: Lartigue A]]
-
[[Category: Tegoni, M]]
+
[[Category: Mosbah A]]
-
[[Category: Chemosensory]]
+
[[Category: Tegoni M]]
-
[[Category: Lipid transport]]
+
-
[[Category: Pheromone]]
+

Current revision

NMR Solution Structure of the Chemosensory Protein CSP2 from Moth Mamestra brassicae

PDB ID 1k19

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools