1k3k
From Proteopedia
(Difference between revisions)
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==Solution Structure of a Bcl-2 Homolog from Kaposi's Sarcoma Virus== | ==Solution Structure of a Bcl-2 Homolog from Kaposi's Sarcoma Virus== | ||
- | <StructureSection load='1k3k' size='340' side='right'caption='[[1k3k | + | <StructureSection load='1k3k' size='340' side='right'caption='[[1k3k]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1k3k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1k3k]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_gammaherpesvirus_8 Human gammaherpesvirus 8]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1K3K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1K3K FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k3k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k3k OCA], [https://pdbe.org/1k3k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k3k RCSB], [https://www.ebi.ac.uk/pdbsum/1k3k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k3k ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1k3k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1k3k OCA], [https://pdbe.org/1k3k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1k3k RCSB], [https://www.ebi.ac.uk/pdbsum/1k3k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1k3k ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q76RI8_HHV8 Q76RI8_HHV8] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k3k ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1k3k ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Kaposi sarcoma-associated herpes virus (KSHV) contains a gene that has functional and sequence homology to the apoptotic Bcl-2 family of proteins [Sarid, R., Sato, T., Bohenzky, R. A., Russo, J. J. & Chang, Y. (1997) Nat. Med. 3, 293-298]. The viral Bcl-2 protein promotes survival of infected cells and may contribute to the development of Kaposi sarcoma tumors [Boshoff, C. & Chang, Y. (2001) Annu. Rev. Med. 52, 453-470]. Here we describe the solution structure of the viral Bcl-2 homolog from KSHV. Comparison of the KSHV Bcl-2 structure to that of Bcl-2 and Bcl-x(L) shows that although the overall fold is the same, there are key differences in the lengths of the helices and loops. Binding studies on peptides derived from the Bcl-2 homology region 3 of proapoptotic family members indicate that the specificity of the viral protein is very different from what was previously observed for Bcl-x(L) and Bcl-2, suggesting that the viral protein has evolved to have a different mechanism of action than the host proteins. | ||
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- | Solution structure of a Bcl-2 homolog from Kaposi sarcoma virus.,Huang Q, Petros AM, Virgin HW, Fesik SW, Olejniczak ET Proc Natl Acad Sci U S A. 2002 Mar 19;99(6):3428-33. PMID:11904405<ref>PMID:11904405</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1k3k" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Human gammaherpesvirus 8]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Fesik | + | [[Category: Fesik SW]] |
- | [[Category: Huang | + | [[Category: Huang Q]] |
- | [[Category: Olejniczak | + | [[Category: Olejniczak ET]] |
- | [[Category: Petros | + | [[Category: Petros AM]] |
- | [[Category: Virgin | + | [[Category: Virgin HW]] |
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Revision as of 07:57, 3 April 2024
Solution Structure of a Bcl-2 Homolog from Kaposi's Sarcoma Virus
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