1l2z
From Proteopedia
(Difference between revisions)
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==CD2BP2-GYF domain in complex with proline-rich CD2 tail segment peptide== | ==CD2BP2-GYF domain in complex with proline-rich CD2 tail segment peptide== | ||
- | <StructureSection load='1l2z' size='340' side='right'caption='[[1l2z | + | <StructureSection load='1l2z' size='340' side='right'caption='[[1l2z]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1l2z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1l2z]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1L2Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1L2Z FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l2z OCA], [https://pdbe.org/1l2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l2z RCSB], [https://www.ebi.ac.uk/pdbsum/1l2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l2z ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1l2z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1l2z OCA], [https://pdbe.org/1l2z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1l2z RCSB], [https://www.ebi.ac.uk/pdbsum/1l2z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1l2z ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/CD2B2_HUMAN CD2B2_HUMAN] | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1l2z ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1l2z ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Intracellular protein interaction domains are essential for eukaryotic signaling. In T cells, the CD2BP2 adaptor binds two membrane-proximal proline-rich motifs in the CD2 cytoplasmic tail via its GYF domain, thereby regulating interleukin-2 production. Here we present the structure of the GYF domain in complex with a CD2 tail peptide. Unlike SH3 domains, which use two surface pockets to accommodate proline residues of ligands, the GYF domain employs phylogenetically conserved hydrophobic residues to create a single interaction surface. NMR analysis shows that the Fyn but not the Lck tyrosine kinase SH3 domain competes with CD2BP2 GYF-domain binding to the same CD2 proline-rich sequence in vitro. To test the in vivo significance of this competition, we used co-immunoprecipitation experiments and found that CD2BP2 is the ligand of the membrane-proximal proline-rich tandem repeat of CD2 in detergent-soluble membrane compartments, but is replaced by Fyn SH3 after CD2 is translocated into lipid rafts upon CD2 ectodomain clustering. This unveils the mechanism of a switch of CD2 function due to an extracellular mitogenic signal. | ||
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- | Dynamic interaction of CD2 with the GYF and the SH3 domain of compartmentalized effector molecules.,Freund C, Kuhne R, Yang H, Park S, Reinherz EL, Wagner G EMBO J. 2002 Nov 15;21(22):5985-95. PMID:12426371<ref>PMID:12426371</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1l2z" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Freund | + | [[Category: Freund C]] |
- | [[Category: Kuhne | + | [[Category: Kuhne R]] |
- | [[Category: Park | + | [[Category: Park S]] |
- | [[Category: Reinherz | + | [[Category: Reinherz EL]] |
- | [[Category: Wagner | + | [[Category: Wagner G]] |
- | [[Category: Yang | + | [[Category: Yang H]] |
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Revision as of 08:05, 3 April 2024
CD2BP2-GYF domain in complex with proline-rich CD2 tail segment peptide
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Categories: Homo sapiens | Large Structures | Freund C | Kuhne R | Park S | Reinherz EL | Wagner G | Yang H