Coatomer 3D structures

From Proteopedia

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Revision as of 10:28, 7 April 2024

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Coatomer

Updated on 07-April-2024 {{#tree:id=OrganizedByTopic|openlevels=0|

• Coatomer I; Domains WD-repeat 1-320; mu-homoloy (HMD) 268-546; C-terminal 879-1233

• Coatomer I alpha subunit

• • 6pbg – hCOP1 alpha subunit WD-repeat domain - human
    
  • 4j87 – fyCOP1 alpha subunit 555-874 – fission yeast
    
  • 4j8b – fyCOP1 alpha subunit + Emp47p
    
  • 7s22, 8evl – fyCOP1 alpha subunit WD domain
    
  • 7s22, 8eny, 8eo0 – fyCOP1 alpha subunit WD domain (mutant)
    
  • 7s16 – fyCOP1 alpha subunit WD domain (mutant) + Emp47p
    
  • 4j8g – fyCOP1 alpha subunit WD domain + gp19k
    

• Coatomer I beta’ subunit

• • 8d30 – hCOP1 beta’ subunit WD-repeat domains
    
  • 8ewx, 8f0e – yCOP1 beta’ subunit WD-repeat domain
    
  • [[8fszx] – yCOP1 beta’ subunit WD-repeat domain (mutant)
    
  • 4j78 – yCOP1 beta’ subunit WD-repeat domain + Emp47p
    
  • 4j84 – yCOP1 beta’ subunit WD-repeat domain + Scyl1
    
  • 4j77, 4j86 – yCOP1 beta’ subunit WD-repeat domain + Wbp1
    
  • 4j79, 8ens, 8enw, 8hqt, 8hqw – yCOP1 beta’ subunit WD-repeat domain + SARS-CoV-2 peptide
    
  • 8enx – yCOP1 beta’ subunit WD-repeat domain (mutant) + SARS-CoV-2 peptide
    
  • 2yno, 2ynn, 2ynp, 4j73, 4j81, 4j82, 8hqv, 8hqx – yCOP1 beta’ subunit WD-repeat domains + peptide
    
  • 8d41 – yCOP1 beta’ subunit WD-repeat domain + piperazine derivative
    

• Coatomer I gamma subunit

• • 1r4x – hCOP1 gamma subunit 608-874
    
  • 1pzd – bCOP1 gamma subunit 555-874 - bovine
    

• Coatomer I delta subunit

• • 4o8q – bCOP1 delta MHD
    
  • 5fjw, 5fjx, 5fjz – yCOP1 delta MHD
    
  • 5fk0 – yCOP1 delta MHD + peptide
    

• Coatomer I zeta-1 subunit

• • 5mc7 – hCOP1 zeta-1 subunit 1-177
    
  • 2hf6 – hCOP1 zeta-1 subunit 1-149 - NMR
    

• Coatomer I alpha+beta’ subunits

• • 3mkq – yCOP1 alpha 642-818 + beta’ subunits 1-814
    

• Coatomer I beta’+delta subunits

• • 5mu7 – COP1 beta + delta-like subunits – Thermochaetoides thermophila
    

• Coatomer I alpha+epsilon subunits

• • 6tzt – hCOP1 alpha C-terminal + epsilon subunit 1-308
    
  • 3mkr – bCOP1 alpha C-terminal + epsilon subunit 17-307
    
  • 3mv2, 3mv3, 6u3w – yCOP1 alpha + epsilon subunits - yeast
    

• Coatomer I gamma+zeta-1 subunits

• • 3tjz – bCOP1 gamma WD-repeat domain + zeta-1 1-153 + Arf1
    

• Coatomer I alpha+beta’+gamma+delta+zeta-1 subunits

• • 5a1u, 5a1v, 5a1w, 5a1x, 5a1y, 5nzr, 5nzt, 5nzu, 5nzv – mCOP1 in coat complex – mouse – Cryo EM
    
  • 5nzs – mCOP1 in coat complex+ Arf GAP2 – Cryo EM
    

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