User:Karisma Moll/Sandbox 1

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Line 13: Line 13:
== Structure ==
== Structure ==
-
Something about interactions... <scene name='10/1037491/Vildagliptin_intxns/2'>vildagliptin</scene>
+
Something about interactions...
<scene name='10/1037491/Vildagliptin_binding/1'>vildagliptin binding</scene>
<scene name='10/1037491/Vildagliptin_binding/1'>vildagliptin binding</scene>
Line 20: Line 20:
<scene name='10/1037491/Dppiv_with_vildagliptin_movie/3'>DPPIV intro movie</scene>
<scene name='10/1037491/Dppiv_with_vildagliptin_movie/3'>DPPIV intro movie</scene>
-
<scene name='10/1037489/Binding_pockets_with_surface/1'>binding pockets</scene>
+
<scene name='10/1037489/Binding_pockets_with_surface/2'>new binding pockets</scene>
NEED TO INSERT TEXT ABOUT THE BINDING POCKETS TO GO WITH MY SCENE
NEED TO INSERT TEXT ABOUT THE BINDING POCKETS TO GO WITH MY SCENE
will insert something to go with saxagliptin scene below:
will insert something to go with saxagliptin scene below:
Line 28: Line 28:
<scene name='10/1037489/Sax_intxn/1'>sax intxn</scene>
<scene name='10/1037489/Sax_intxn/1'>sax intxn</scene>
please work
please work
-
<scene name='10/1037489/Vildagliptin_intxns/1'>vild intxn</scene>
+
<scene name='10/1037489/Vildagliptin_intxns/2'>new vild intxns</scene>
idk at this point <scene name='10/1037489/Vildagliptin_in_pockets/1'>pocket</scene>
idk at this point <scene name='10/1037489/Vildagliptin_in_pockets/1'>pocket</scene>
Line 60: Line 60:
<scene name='10/1037493/Oxyanion_hole/1'>oxyanion hole</scene>
<scene name='10/1037493/Oxyanion_hole/1'>oxyanion hole</scene>
=== Karisma ===
=== Karisma ===
-
<scene name='10/1037489/Binding_pockets_with_surface/1'>binding pockets</scene>
+
<scene name='10/1037489/Binding_pockets_with_surface/2'>new binding pockets</scene>
-
<scene name='10/1037489/Vildagliptin_intxns/1'>vild intxn</scene>
+
<scene name='10/1037489/Vildagliptin_intxns/2'>new vild intxns</scene>
<scene name='10/1037489/Vildagliptin_in_pockets/1'>pocket</scene> (could remove catalytic triad and rework)
<scene name='10/1037489/Vildagliptin_in_pockets/1'>pocket</scene> (could remove catalytic triad and rework)
<scene name='10/1037489/Catalytic_triad/5'>catalytic triad</scene>
<scene name='10/1037489/Catalytic_triad/5'>catalytic triad</scene>

Revision as of 13:34, 16 April 2024

DPPIV in Humans

PDB 6B1E for DPPIV in complex with Vildagliptin

Drag the structure with the mouse to rotate

References

  1. Ahrén B. DPP-4 Inhibition and the Path to Clinical Proof. Front Endocrinol (Lausanne). 2019 Jun 19;10:376. PMID:31275243 doi:10.3389/fendo.2019.00376
  2. Khalse M, Bhargava A. A Review on Cardiovascular Outcome Studies of Dipeptidyl Peptidase-4 Inhibitors. Indian J Endocrinol Metab. 2018 Sep-Oct;22(5):689-695. PMID:30294582 doi:10.4103/ijem.IJEM_104_18
  3. Hocher B, Reichetzeder C, Alter ML. Renal and cardiac effects of DPP4 inhibitors--from preclinical development to clinical research. Kidney Blood Press Res. 2012;36(1):65-84. PMID:22947920 doi:10.1159/000339028
  4. Zhong J, Rajagopalan S. Dipeptidyl Peptidase-4 Regulation of SDF-1/CXCR4 Axis: Implications for Cardiovascular Disease. Front Immunol. 2015 Sep 25;6:477. PMID:26441982 doi:10.3389/fimmu.2015.00477
  5. Sharma A, Ren X, Zhang H, Pandey GN. Effect of depression and suicidal behavior on neuropeptide Y (NPY) and its receptors in the adult human brain: A postmortem study. Prog Neuropsychopharmacol Biol Psychiatry. 2022 Jan 10;112:110428. PMID:34411658 doi:10.1016/j.pnpbp.2021.110428
  6. Ntafam CN, Beutler BD, Harris RD. Incarcerated gravid uterus: A rare but potentially devastating obstetric complication. Radiol Case Rep. 2022 Mar 10;17(5):1583-1586. PMID:35309386 doi:10.1016/j.radcr.2022.02.034
  7. 7.0 7.1 Hiramatsu H, Kyono K, Higashiyama Y, Fukushima C, Shima H, Sugiyama S, Inaka K, Yamamoto A, Shimizu R. The structure and function of human dipeptidyl peptidase IV, possessing a unique eight-bladed beta-propeller fold. Biochem Biophys Res Commun. 2003 Mar 21;302(4):849-54. PMID:12646248
  8. Abbott CA, McCaughan GW, Levy MT, Church WB, Gorrell MD. Binding to human dipeptidyl peptidase IV by adenosine deaminase and antibodies that inhibit ligand binding involves overlapping, discontinuous sites on a predicted beta propeller domain. Eur J Biochem. 1999 Dec;266(3):798-810. PMID:10583373 doi:10.1046/j.1432-1327.1999.00902.x

Student Contributors

  • Karisma Moll
  • Merritt Jugo
  • Sam Magnabosco

Proteopedia Page Contributors and Editors (what is this?)

Karisma Moll

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