1qkf
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
==SOLUTION STRUCTURE OF THE RIBOSOMAL PROTEIN S19 FROM THERMUS THERMOPHILUS== | ==SOLUTION STRUCTURE OF THE RIBOSOMAL PROTEIN S19 FROM THERMUS THERMOPHILUS== | ||
| - | <StructureSection load='1qkf' size='340' side='right'caption='[[1qkf | + | <StructureSection load='1qkf' size='340' side='right'caption='[[1qkf]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1qkf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1qkf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QKF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QKF FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qkf OCA], [https://pdbe.org/1qkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qkf RCSB], [https://www.ebi.ac.uk/pdbsum/1qkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qkf ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qkf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qkf OCA], [https://pdbe.org/1qkf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qkf RCSB], [https://www.ebi.ac.uk/pdbsum/1qkf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qkf ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/RS19_THETH RS19_THETH] Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (By similarity). | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 19: | Line 19: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qkf ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qkf ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | Ribosomal protein S19 is a 10.6 kDa protein in the small subunit of the prokaryotic ribosome. We have determined a high-resolution solution structure of S19 from Thermus thermophilus. Structures were calculated using 1160 distance and dihedral angle restraints derived from (1)H, (15)N and (13)C NMR spectra. The structures show that S19 is a mixed alpha/beta protein with long disordered tails. The folding topology is not homologous to that of any other known protein structure. Potential rRNA and protein binding sites have been identified on the S19 surface. | ||
| - | |||
| - | Solution structure of the ribosomal protein S19 from Thermus thermophilus.,Helgstrand M, Rak AV, Allard P, Davydova N, Garber MB, Hard T J Mol Biol. 1999 Oct 8;292(5):1071-81. PMID:10512703<ref>PMID:10512703</ref> | ||
| - | |||
| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 1qkf" style="background-color:#fffaf0;"></div> | ||
==See Also== | ==See Also== | ||
*[[Ribosomal protein S19|Ribosomal protein S19]] | *[[Ribosomal protein S19|Ribosomal protein S19]] | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: Flavobacterium thermophilum yoshida and oshima 1971]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Allard, P]] | ||
| - | [[Category: Davydova, N]] | ||
| - | [[Category: Garber, M B]] | ||
| - | [[Category: Hard, T]] | ||
| - | [[Category: Helgstrand, M]] | ||
| - | [[Category: Rak, A V]] | ||
| - | [[Category: Ribosomal protein]] | ||
| - | [[Category: Ribosome]] | ||
| - | [[Category: S19]] | ||
[[Category: Thermus thermophilus]] | [[Category: Thermus thermophilus]] | ||
| + | [[Category: Allard P]] | ||
| + | [[Category: Davydova N]] | ||
| + | [[Category: Garber MB]] | ||
| + | [[Category: Hard T]] | ||
| + | [[Category: Helgstrand M]] | ||
| + | [[Category: Rak AV]] | ||
Revision as of 06:04, 17 April 2024
SOLUTION STRUCTURE OF THE RIBOSOMAL PROTEIN S19 FROM THERMUS THERMOPHILUS
| |||||||||||
