User:Karisma Moll/Sandbox 1

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<StructureSection load='6b1e' size='350' frame='true' side='right' caption='PDB 6B1E for DPPIV in complex with Vildagliptin' scene='10/1037489/Starter_dppiv_colors/1'>
<StructureSection load='6b1e' size='350' frame='true' side='right' caption='PDB 6B1E for DPPIV in complex with Vildagliptin' scene='10/1037489/Starter_dppiv_colors/1'>
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<scene name='10/1037493/Homodimer/4'>Homodimer</scene>
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<scene name='10/1037489/Homodimer/1'>homodimer with caption</scene>
== Introduction ==
== Introduction ==
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=== Overview ===
=== Overview ===
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<scene name='10/1037493/Cystine_rich_region/1'>Cystine-Rich Region</scene>
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<scene name='10/1037489/Cystine_rich_region/1'>cystine rich region</scene>
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<scene name='10/1037493/Disulfide_bonds/1'>Disulfide Bonds</scene>
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<scene name='10/1037489/Disulfide_bonds/1'>disulfide bonds</scene>
<scene name='10/1037489/Binding_pockets_with_surface/2'>new binding pockets</scene>
<scene name='10/1037489/Binding_pockets_with_surface/2'>new binding pockets</scene>
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please work
please work
<scene name='10/1037489/Vildagliptin_intxns/3'>new vild</scene>
<scene name='10/1037489/Vildagliptin_intxns/3'>new vild</scene>
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<scene name='10/1037493/Catalytic_domain/1'>Catalytic Domain</scene>
 
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DPPIV is found in two forms in the body: a membrane bound monomer and a blood soluble dimer. All structural renderings of DPPIV start at the 39th residue, meaning it does not include the intracellular domain, transmembrane region, and part of the cleavage site. The DPPIV [https://en.wikipedia.org/wiki/Beta-propeller beta propellor] is notable as it differs from all the other enzymes in the [https://en.wikipedia.org/wiki/Dipeptidyl_peptidase dipeptidyl peptidase family]. In all other DPPs the beta propeller has ligand gating potential; however, the <scene name='10/1037493/Beta_propeller/3'>Beta-propeller</scene> is an asymmetrical 8 blade propeller that does not function as a ligand gate by rather acts as a binding site which allows DPPIV to conjugate with [https://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine Deaminase]. <ref name="Abbott">PMID:10583373</ref>
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<scene name='10/1037489/Catalytic_domain/1'>catalytic domain</scene>
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DPPIV is found in two forms in the body: a membrane bound monomer and a blood soluble dimer. All structural renderings of DPPIV start at the 39th residue, meaning it does not include the intracellular domain, transmembrane region, and part of the cleavage site. The DPPIV [https://en.wikipedia.org/wiki/Beta-propeller beta propellor] is notable as it differs from all the other enzymes in the [https://en.wikipedia.org/wiki/Dipeptidyl_peptidase dipeptidyl peptidase family]. In all other DPPs the beta propeller has ligand gating potential; however, the <scene name='10/1037489/Beta_propeller/2'>beta propeller</scene> is an asymmetrical 7 blade propeller that does not function as a ligand gate by rather acts as a binding site which allows DPPIV to conjugate with [https://en.wikipedia.org/wiki/Adenosine_deaminase Adenosine Deaminase]. <ref name="Abbott">PMID:10583373</ref>
=== Catalytic Triad ===
=== Catalytic Triad ===
<scene name='10/1037491/Catalytic_domain/3'>catalytic domain</scene>
<scene name='10/1037491/Catalytic_domain/3'>catalytic domain</scene>

Revision as of 15:23, 17 April 2024

Structure and Function of Dipeptidyl Peptidase IV (DPPIV) in Humans

PDB 6B1E for DPPIV in complex with Vildagliptin

Drag the structure with the mouse to rotate

References

  1. Ahrén B. DPP-4 Inhibition and the Path to Clinical Proof. Front Endocrinol (Lausanne). 2019 Jun 19;10:376. PMID:31275243 doi:10.3389/fendo.2019.00376
  2. Khalse M, Bhargava A. A Review on Cardiovascular Outcome Studies of Dipeptidyl Peptidase-4 Inhibitors. Indian J Endocrinol Metab. 2018 Sep-Oct;22(5):689-695. PMID:30294582 doi:10.4103/ijem.IJEM_104_18
  3. Hocher B, Reichetzeder C, Alter ML. Renal and cardiac effects of DPP4 inhibitors--from preclinical development to clinical research. Kidney Blood Press Res. 2012;36(1):65-84. PMID:22947920 doi:10.1159/000339028
  4. Zhong J, Rajagopalan S. Dipeptidyl Peptidase-4 Regulation of SDF-1/CXCR4 Axis: Implications for Cardiovascular Disease. Front Immunol. 2015 Sep 25;6:477. PMID:26441982 doi:10.3389/fimmu.2015.00477
  5. Sharma A, Ren X, Zhang H, Pandey GN. Effect of depression and suicidal behavior on neuropeptide Y (NPY) and its receptors in the adult human brain: A postmortem study. Prog Neuropsychopharmacol Biol Psychiatry. 2022 Jan 10;112:110428. PMID:34411658 doi:10.1016/j.pnpbp.2021.110428
  6. Ntafam CN, Beutler BD, Harris RD. Incarcerated gravid uterus: A rare but potentially devastating obstetric complication. Radiol Case Rep. 2022 Mar 10;17(5):1583-1586. PMID:35309386 doi:10.1016/j.radcr.2022.02.034
  7. 7.0 7.1 Hiramatsu H, Kyono K, Higashiyama Y, Fukushima C, Shima H, Sugiyama S, Inaka K, Yamamoto A, Shimizu R. The structure and function of human dipeptidyl peptidase IV, possessing a unique eight-bladed beta-propeller fold. Biochem Biophys Res Commun. 2003 Mar 21;302(4):849-54. PMID:12646248
  8. Abbott CA, McCaughan GW, Levy MT, Church WB, Gorrell MD. Binding to human dipeptidyl peptidase IV by adenosine deaminase and antibodies that inhibit ligand binding involves overlapping, discontinuous sites on a predicted beta propeller domain. Eur J Biochem. 1999 Dec;266(3):798-810. PMID:10583373 doi:10.1046/j.1432-1327.1999.00902.x

Student Contributors

  • Karisma Moll
  • Merritt Jugo
  • Sam Magnabosco

Proteopedia Page Contributors and Editors (what is this?)

Karisma Moll

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