User:Isabel Kluszynski/Sandbox 1
From Proteopedia
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Another example of a difference in receptor confirmation can be seen with GLP-1R R299. With GLP-1 bound, <scene name='10/1037487/Glp1_comparison/3'>GLP-1R R299</scene> faces the peptide and is able to hydrogen bond with either GLP-1 S17 or E21. When Tirzepatide is bound, <scene name='10/1037487/Tirzepatide/7'>GLP-1R R299</scene> flips away from the peptide and can no longer hydrogen bond with any Tirzepatide residues. <ref name="Sun"/> Additionally, differential binding of GLP-1 and Tirzepatide modifies how the transmembrane domain interacts with the G-alpha subunit to initiate a signal cascade. For example, when GLP-1 is bound to the receptor, <scene name='10/1037487/G_alpha_glp/2'>GLP-1R F257</scene> is able to participate in a pi stacking interaction with G-alpha F376. When Tirzepatide is bound, <scene name='10/1037487/G_alpha_tirz/3'>GLP-1R 257</scene> is oriented facing away from the G-alpha subunit. <ref name="Zhao"/> | Another example of a difference in receptor confirmation can be seen with GLP-1R R299. With GLP-1 bound, <scene name='10/1037487/Glp1_comparison/3'>GLP-1R R299</scene> faces the peptide and is able to hydrogen bond with either GLP-1 S17 or E21. When Tirzepatide is bound, <scene name='10/1037487/Tirzepatide/7'>GLP-1R R299</scene> flips away from the peptide and can no longer hydrogen bond with any Tirzepatide residues. <ref name="Sun"/> Additionally, differential binding of GLP-1 and Tirzepatide modifies how the transmembrane domain interacts with the G-alpha subunit to initiate a signal cascade. For example, when GLP-1 is bound to the receptor, <scene name='10/1037487/G_alpha_glp/2'>GLP-1R F257</scene> is able to participate in a pi stacking interaction with G-alpha F376. When Tirzepatide is bound, <scene name='10/1037487/G_alpha_tirz/3'>GLP-1R 257</scene> is oriented facing away from the G-alpha subunit. <ref name="Zhao"/> | ||
| - | Referencing the sequence alignment, GLP-1 F28 and W31 are in the same position as Tirzepatide F22 and W25, indicating that the phenylalanine and tryptophan residues are conserved among the two sequences. As discussed previously in the GLP-1 binding interactions subsection, <scene name='10/1037487/Cterm_glp/ | + | Referencing the sequence alignment, GLP-1 F28 and W31 are in the same position as Tirzepatide F22 and W25, indicating that the phenylalanine and tryptophan residues are conserved among the two sequences. As discussed previously in the GLP-1 binding interactions subsection, <scene name='10/1037487/Cterm_glp/11'>GLP-1 F28</scene> and W31 participate in a pi stacking interaction with GLP-1R W214. Similarly, <scene name='10/1037487/Tirzepatide/8'>Tirz F22</scene> and W25 are also able to interact aromatically with GLP-1R W214. |
==Medical Relevance== | ==Medical Relevance== | ||
Revision as of 19:08, 28 April 2024
GLP-1R Homo sapiens
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References
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- β 2.0 2.1 Seino Y, Fukushima M, Yabe D. GIP and GLP-1, the two incretin hormones: Similarities and differences. J Diabetes Investig. 2010 Apr 22;1(1-2):8-23. PMID:24843404 doi:10.1111/j.2040-1124.2010.00022.x
- β Zhang X, Belousoff MJ, Zhao P, Kooistra AJ, Truong TT, Ang SY, Underwood CR, Egebjerg T, Ε enel P, Stewart GD, Liang YL, Glukhova A, Venugopal H, Christopoulos A, Furness SGB, Miller LJ, Reedtz-Runge S, Langmead CJ, Gloriam DE, Danev R, Sexton PM, Wootten D. Differential GLP-1R Binding and Activation by Peptide and Non-peptide Agonists. Mol Cell. 2020 Nov 5;80(3):485-500.e7. PMID:33027691 doi:10.1016/j.molcel.2020.09.020
- β 4.0 4.1 4.2 Zhao F, Zhou Q, Cong Z, Hang K, Zou X, Zhang C, Chen Y, Dai A, Liang A, Ming Q, Wang M, Chen LN, Xu P, Chang R, Feng W, Xia T, Zhang Y, Wu B, Yang D, Zhao L, Xu HE, Wang MW. Structural insights into multiplexed pharmacological actions of tirzepatide and peptide 20 at the GIP, GLP-1 or glucagon receptors. Nat Commun. 2022 Feb 25;13(1):1057. PMID:35217653 doi:10.1038/s41467-022-28683-0
- β 5.0 5.1 5.2 5.3 5.4 Sun B, Willard FS, Feng D, Alsina-Fernandez J, Chen Q, Vieth M, Ho JD, Showalter AD, Stutsman C, Ding L, Suter TM, Dunbar JD, Carpenter JW, Mohammed FA, Aihara E, Brown RA, Bueno AB, Emmerson PJ, Moyers JS, Kobilka TS, Coghlan MP, Kobilka BK, Sloop KW. Structural determinants of dual incretin receptor agonism by tirzepatide. Proc Natl Acad Sci U S A. 2022 Mar 29;119(13):e2116506119. PMID:35333651 doi:10.1073/pnas.2116506119
- β Nauck MA, Quast DR, Wefers J, Meier JJ. GLP-1 receptor agonists in the treatment of type 2 diabetes Mol Metab. 2021 Apr;46:101102. PMID:33068776 doi:10.1016/j.molmet.2020.101102
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Student Contributors
- Isabel Kluszynski
- Makenna Marcinek
