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2ksz

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==The solution structure of the Magnesium bound soybean calmodulin isoform 4 N-domain==
==The solution structure of the Magnesium bound soybean calmodulin isoform 4 N-domain==
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<StructureSection load='2ksz' size='340' side='right'caption='[[2ksz]], [[NMR_Ensembles_of_Models | 5 NMR models]]' scene=''>
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<StructureSection load='2ksz' size='340' side='right'caption='[[2ksz]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2ksz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KSZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KSZ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2ksz]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KSZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KSZ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2roa|2roa]], [[1f70|1f70]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SCaM-4 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3847 Glycine hispida])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ksz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ksz OCA], [https://pdbe.org/2ksz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ksz RCSB], [https://www.ebi.ac.uk/pdbsum/2ksz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ksz ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ksz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ksz OCA], [https://pdbe.org/2ksz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ksz RCSB], [https://www.ebi.ac.uk/pdbsum/2ksz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ksz ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q39890_SOYBN Q39890_SOYBN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ksz ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ksz ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Soybean calmodulin isoform 4 (sCaM4) is a plant calcium binding protein, regulating cellular responses to the second messenger Ca(2+). We have found that the metal ion free (apo-) form of sCaM4 possesses a half unfolded structure, with the N-terminal domain unfolded and the C-terminal domain folded. This result was unexpected as the apo-forms of both soybean calmodulin isoform 1 (sCaM1) and mammalian CaM (mCaM) are fully folded. Due to the fact that free Mg(2+) ions are always present at high concentrations in cells (0.5 approximately 2 mM), we suggest that Mg(2+) should be bound to sCaM4 in non-activated cells. CD studies revealed that in the presence of Mg(2+) the initially unfolded N-terminal domain of sCaM4 folds into an alpha-helix-rich structure, similar to the Ca(2+)-form. We have used the NMR backbone residual dipolar coupling (RDC) restraints (1)D(NH), (1)D(CalphaHalpha), and (1)D(C)'(Calpha) to determine the solution structure of the N-terminal domain of Mg(2+)-sCaM4 (Mg(2+)-sCaM4-NT). Compared with the known structure of Ca(2+)-sCaM4, the structure of the Mg(2+)-sCaM4-NT does not fully open the hydrophobic pocket, which was further confirmed by the use of the fluorescent probe ANS. Tryptophan fluorescence experiments were used to study the interactions between Mg(2+)-sCaM4 and CaM-binding peptides derived from smooth muscle myosin light chain kinase as well as plant glutamate decarboxylase. These results suggest that Mg(2+)-sCaM4 does not bind to Ca(2+)-CaM target peptides, and therefore is functionally similar to apo-mCaM. The Mg(2+)- and apo- structures of the sCaM4-NT provide unique insights into the structure and function of some plant calmodulins in resting cells.
 
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The solution structure of the Mg(2+)- form of soybean calmodulin isoform 4 reveals unique features of plant calmodulins in resting cells.,Huang H, Ishida H, Vogel HJ Protein Sci. 2010 Jan 6. PMID:20054830<ref>PMID:20054830</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 2ksz" style="background-color:#fffaf0;"></div>
 
==See Also==
==See Also==
*[[Calmodulin 3D structures|Calmodulin 3D structures]]
*[[Calmodulin 3D structures|Calmodulin 3D structures]]
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Glycine hispida]]
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[[Category: Glycine max]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Huang, H]]
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[[Category: Huang H]]
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[[Category: Ishida, H]]
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[[Category: Ishida H]]
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[[Category: Vogel, H J]]
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[[Category: Vogel HJ]]
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[[Category: Magnesium]]
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[[Category: Metal binding protein]]
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[[Category: Residual dipolar coupling]]
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[[Category: Soybean calmodulin isoform 4]]
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Current revision

The solution structure of the Magnesium bound soybean calmodulin isoform 4 N-domain

PDB ID 2ksz

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