2mqt

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Current revision (07:01, 1 May 2024) (edit) (undo)
 
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mqt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mqt OCA], [https://pdbe.org/2mqt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mqt RCSB], [https://www.ebi.ac.uk/pdbsum/2mqt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mqt ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mqt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mqt OCA], [https://pdbe.org/2mqt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mqt RCSB], [https://www.ebi.ac.uk/pdbsum/2mqt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mqt ProSAT]</span></td></tr>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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To prime reverse transcription, retroviruses require annealing of a transfer RNA molecule to the U5 primer binding site (U5-PBS) region of the viral genome. The residues essential for primer annealing are initially locked in intramolecular interactions; hence, annealing requires the chaperone activity of the retroviral nucleocapsid (NC) protein to facilitate structural rearrangements. Here we show that, unlike classical chaperones, the Moloney murine leukaemia virus NC uses a unique mechanism for remodelling: it specifically targets multiple structured regions in both the U5-PBS and tRNAPro primer that otherwise sequester residues necessary for annealing. This high-specificity and high-affinity binding by NC consequently liberates these sequestered residues-which are exactly complementary-for intermolecular interactions. Furthermore, NC utilizes a step-wise, entropy-driven mechanism to trigger both residue-specific destabilization and residue-specific release. Our structures of NC bound to U5-PBS and tRNAPro reveal the structure-based mechanism for retroviral primer annealing and provide insights as to how ATP-independent chaperones can target specific RNAs amidst the cellular milieu of non-target RNAs.
 
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A structure-based mechanism for tRNA and retroviral RNA remodelling during primer annealing.,Miller SB, Yildiz FZ, Lo JA, Wang B, D'Souza VM Nature. 2014 Sep 7. doi: 10.1038/nature13709. PMID:25209668<ref>PMID:25209668</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 2mqt" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
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Current revision

Solution NMR structure of the U5-primer binding site (U5-PBS) domain of murine leukemia virus RNA genome

PDB ID 2mqt

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