This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.




1run

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
[[Image:1run.gif|left|200px]]
[[Image:1run.gif|left|200px]]
-
{{Structure
+
<!--
-
|PDB= 1run |SIZE=350|CAPTION= <scene name='initialview01'>1run</scene>, resolution 2.700&Aring;
+
The line below this paragraph, containing "STRUCTURE_1run", creates the "Structure Box" on the page.
-
|SITE=
+
You may change the PDB parameter (which sets the PDB file loaded into the applet)
-
|LIGAND= <scene name='pdbligand=CMP:ADENOSINE-3&#39;,5&#39;-CYCLIC-MONOPHOSPHATE'>CMP</scene>, <scene name='pdbligand=DA:2&#39;-DEOXYADENOSINE-5&#39;-MONOPHOSPHATE'>DA</scene>, <scene name='pdbligand=DC:2&#39;-DEOXYCYTIDINE-5&#39;-MONOPHOSPHATE'>DC</scene>, <scene name='pdbligand=DG:2&#39;-DEOXYGUANOSINE-5&#39;-MONOPHOSPHATE'>DG</scene>, <scene name='pdbligand=DT:THYMIDINE-5&#39;-MONOPHOSPHATE'>DT</scene>
+
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
-
|ACTIVITY=
+
or leave the SCENE parameter empty for the default display.
-
|GENE=
+
-->
-
|DOMAIN=
+
{{STRUCTURE_1run| PDB=1run | SCENE= }}
-
|RELATEDENTRY=
+
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1run FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1run OCA], [http://www.ebi.ac.uk/pdbsum/1run PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1run RCSB]</span>
+
-
}}
+
'''CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE'''
'''CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE'''
Line 30: Line 27:
[[Category: Zhang, X.]]
[[Category: Zhang, X.]]
[[Category: 3d-structure]]
[[Category: 3d-structure]]
-
[[Category: activator]]
+
[[Category: Activator]]
-
[[Category: camp-binding]]
+
[[Category: Camp-binding]]
-
[[Category: dna-binding]]
+
[[Category: Dna-binding]]
-
[[Category: transcription regulation]]
+
[[Category: Transcription regulation]]
-
 
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:55:52 2008''
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:33:13 2008''
+

Revision as of 04:55, 3 May 2008

Template:STRUCTURE 1run

CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE


About this Structure

1RUN is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.

Reference

Aromatic hydrogen bond in sequence-specific protein DNA recognition., Parkinson G, Gunasekera A, Vojtechovsky J, Zhang X, Kunkel TA, Berman H, Ebright RH, Nat Struct Biol. 1996 Oct;3(10):837-41. PMID:8836098 Page seeded by OCA on Sat May 3 07:55:52 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools