6mxq

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==Solution structure of a c-JUN 5' UTR stem-loop associated with specialized cap-dependent translation initiation==
==Solution structure of a c-JUN 5' UTR stem-loop associated with specialized cap-dependent translation initiation==
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<StructureSection load='6mxq' size='340' side='right'caption='[[6mxq]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''>
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<StructureSection load='6mxq' size='340' side='right'caption='[[6mxq]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6mxq]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MXQ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6MXQ FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6mxq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MXQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MXQ FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6mxq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mxq OCA], [http://pdbe.org/6mxq PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6mxq RCSB], [http://www.ebi.ac.uk/pdbsum/6mxq PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6mxq ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mxq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mxq OCA], [https://pdbe.org/6mxq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mxq RCSB], [https://www.ebi.ac.uk/pdbsum/6mxq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mxq ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Specialized translation initiation is a novel form of regulation of protein synthesis, whereby RNA structures within the 5'-UTR regulate translation rates of specific mRNAs. Similar to internal ribosome entry sites (IRESs), specialized translation initiation requires the recruitment of eukaryotic initiation factor 3 (eIF3), but also requires cap recognition by eIF3d, a new 5'-m(7)GTP recognizing protein. How these RNA structures mediate eIF3 recruitment to affect translation of specific mRNAs remains unclear. Here, we report the nuclear magnetic resonance (NMR) structure of a stem-loop within the c-JUN 5' UTR recognized by eIF3 and essential for specialized translation initiation of this well-known oncogene. The structure exhibits similarity to eIF3 recognizing motifs found in hepatitis C virus (HCV)-like IRESs, suggesting mechanistic similarities. This work establishes the RNA structural features involved in c-JUN specialized translation initiation and provides a basis to search for small molecule inhibitors of aberrant expression of the proto-oncogenic c-JUN.
 
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Structure of the RNA Specialized Translation Initiation Element that Recruits eIF3 to the 5'-UTR of c-Jun.,Walker MJ, Shortridge MD, Albin DD, Cominsky LY, Varani G J Mol Biol. 2020 Mar 27;432(7):1841-1855. doi: 10.1016/j.jmb.2020.01.001. Epub, 2020 Jan 14. PMID:31953146<ref>PMID:31953146</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 6mxq" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Shortridge, M]]
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[[Category: Shortridge M]]
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[[Category: Varani, G]]
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[[Category: Varani G]]
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[[Category: Walker, M]]
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[[Category: Walker M]]
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[[Category: C-jun]]
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[[Category: Cap-dependent]]
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[[Category: Eif3]]
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[[Category: Mrna]]
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[[Category: Rna]]
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[[Category: Specialized translation initiation]]
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Solution structure of a c-JUN 5' UTR stem-loop associated with specialized cap-dependent translation initiation

PDB ID 6mxq

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