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6qwn

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Current revision (07:37, 1 May 2024) (edit) (undo)
 
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<StructureSection load='6qwn' size='340' side='right'caption='[[6qwn]], [[Resolution|resolution]] 3.89&Aring;' scene=''>
<StructureSection load='6qwn' size='340' side='right'caption='[[6qwn]], [[Resolution|resolution]] 3.89&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6qwn]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QWN OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6QWN FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6qwn]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6QWN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6QWN FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.892&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PEX1, At3g19020, K13E13.23 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH]), RALFL4, At1g28270, F3H9.8 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6qwn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qwn OCA], [http://pdbe.org/6qwn PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6qwn RCSB], [http://www.ebi.ac.uk/pdbsum/6qwn PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6qwn ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6qwn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6qwn OCA], [https://pdbe.org/6qwn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6qwn RCSB], [https://www.ebi.ac.uk/pdbsum/6qwn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6qwn ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/PLRX1_ARATH PLRX1_ARATH]] Modulates cell morphogenesis by regulating cell wall formation and assembly, and/or growth polarization. [[http://www.uniprot.org/uniprot/RLF4_ARATH RLF4_ARATH]] Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity).
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[https://www.uniprot.org/uniprot/PLRX1_ARATH PLRX1_ARATH] Modulates cell morphogenesis by regulating cell wall formation and assembly, and/or growth polarization.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Plant reproduction relies on the highly regulated growth of the pollen tube for sperm delivery. This process is controlled by secreted RALF signaling peptides, which have previously been shown to be perceived by Catharanthus roseus RLK1-like (CrRLK1Ls) membrane receptor-kinases/LORELEI-like GLYCOLPHOSPHATIDYLINOSITOL (GPI)-ANCHORED PROTEINS (LLG) complexes, or by leucine-rich repeat (LRR) extensin proteins (LRXs). Here, we demonstrate that RALF peptides fold into bioactive, disulfide bond-stabilized proteins that bind the LRR domain of LRX proteins with low nanomolar affinity. Crystal structures of LRX2-RALF4 and LRX8-RALF4 complexes at 3.2- and 3.9-A resolution, respectively, reveal a dimeric arrangement of LRX proteins, with each monomer binding one folded RALF peptide. Structure-based mutations targeting the LRX-RALF4 complex interface, or the RALF4 fold, reduce RALF4 binding to LRX8 in vitro and RALF4 function in growing pollen tubes. Mutants targeting the disulfide-bond stabilized LRX dimer interface fail to rescue lrx infertility phenotypes. Quantitative biochemical assays reveal that RALF4 binds LLGs and LRX cell-wall modules with drastically different binding affinities, and with distinct and mutually exclusive binding modes. Our biochemical, structural, and genetic analyses reveal a complex signaling network by which RALF ligands instruct different signaling proteins using distinct targeting mechanisms.
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Structural basis for recognition of RALF peptides by LRX proteins during pollen tube growth.,Moussu S, Broyart C, Santos-Fernandez G, Augustin S, Wehrle S, Grossniklaus U, Santiago J Proc Natl Acad Sci U S A. 2020 Mar 12. pii: 2000100117. doi:, 10.1073/pnas.2000100117. PMID:32165538<ref>PMID:32165538</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 6qwn" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Arath]]
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[[Category: Arabidopsis thaliana]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Caroline, C]]
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[[Category: Caroline C]]
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[[Category: Grossniklaus, U]]
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[[Category: Grossniklaus U]]
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[[Category: Moussu, S]]
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[[Category: Moussu S]]
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[[Category: Santiago, J]]
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[[Category: Santiago J]]
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[[Category: Santos-Fernandez, G]]
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[[Category: Santos-Fernandez G]]
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[[Category: Wehrle, S]]
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[[Category: Wehrle S]]
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[[Category: Cell wall signaling]]
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[[Category: Leucine rich extensin]]
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[[Category: Lrr]]
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[[Category: Peptide signaling]]
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[[Category: Plant protein]]
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Current revision

Protein peptide complex

PDB ID 6qwn

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