1rut

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[[Image:1rut.gif|left|200px]]
[[Image:1rut.gif|left|200px]]
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{{Structure
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|PDB= 1rut |SIZE=350|CAPTION= <scene name='initialview01'>1rut</scene>, resolution 1.30&Aring;
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The line below this paragraph, containing "STRUCTURE_1rut", creates the "Structure Box" on the page.
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|SITE=
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|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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|GENE= lmo4, ldb1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])
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|DOMAIN=
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{{STRUCTURE_1rut| PDB=1rut | SCENE= }}
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|RELATEDENTRY=[[1m3v|1m3v]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1rut FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rut OCA], [http://www.ebi.ac.uk/pdbsum/1rut PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1rut RCSB]</span>
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'''Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain'''
'''Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain'''
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[[Category: Ryan, D P.]]
[[Category: Ryan, D P.]]
[[Category: Visvader, J E.]]
[[Category: Visvader, J E.]]
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[[Category: b-tandem zipper]]
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[[Category: B-tandem zipper]]
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[[Category: fusion protein]]
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[[Category: Fusion protein]]
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[[Category: lim domain]]
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[[Category: Lim domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:56:11 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:33:17 2008''
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Revision as of 04:56, 3 May 2008

Template:STRUCTURE 1rut

Complex of LMO4 LIM domains 1 and 2 with the ldb1 LID domain


Overview

Nuclear LIM-only (LMO) and LIM-homeodomain (LIM-HD) proteins have important roles in cell fate determination, organ development and oncogenesis. These proteins contain tandemly arrayed LIM domains that bind the LIM interaction domain (LID) of the nuclear adaptor protein LIM domain-binding protein-1 (Ldb1). We have determined a high-resolution X-ray crystal structure of LMO4, a putative breast oncoprotein, in complex with Ldb1-LID, providing the first example of a tandem LIM:Ldb1-LID complex and the first structure of a type-B LIM domain. The complex possesses a highly modular structure with Ldb1-LID binding in an extended manner across both LIM domains of LMO4. The interface contains extensive hydrophobic and electrostatic interactions and multiple backbone-backbone hydrogen bonds. A mutagenic screen of Ldb1-LID, assessed by yeast two-hybrid and competition ELISA analysis, identified key features at the interface and revealed that the interaction is tolerant to mutation. These combined properties provide a mechanism for the binding of Ldb1 to numerous LMO and LIM-HD proteins. Furthermore, the modular extended interface may form a general mode of binding to tandem LIM domains.

About this Structure

1RUT is a Single protein structure of sequence from Mus musculus. Full crystallographic information is available from OCA.

Reference

Tandem LIM domains provide synergistic binding in the LMO4:Ldb1 complex., Deane JE, Ryan DP, Sunde M, Maher MJ, Guss JM, Visvader JE, Matthews JM, EMBO J. 2004 Sep 15;23(18):3589-98. Epub 2004 Sep 2. PMID:15343268 Page seeded by OCA on Sat May 3 07:56:11 2008

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