1s7a
From Proteopedia
(Difference between revisions)
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==NMR structure of the La motif of human La protein== | ==NMR structure of the La motif of human La protein== | ||
- | <StructureSection load='1s7a' size='340' side='right'caption='[[1s7a | + | <StructureSection load='1s7a' size='340' side='right'caption='[[1s7a]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[1s7a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1s7a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S7A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S7A FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s7a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s7a OCA], [https://pdbe.org/1s7a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s7a RCSB], [https://www.ebi.ac.uk/pdbsum/1s7a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s7a ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s7a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s7a OCA], [https://pdbe.org/1s7a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s7a RCSB], [https://www.ebi.ac.uk/pdbsum/1s7a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s7a ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/LA_HUMAN LA_HUMAN] Binds to the 3' poly(U) terminii of nascent RNA polymerase III transcripts, protecting them from exonuclease digestion and facilitating their folding and maturation.<ref>PMID:3192525</ref> <ref>PMID:2470590</ref> | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s7a ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s7a ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | The La protein is a conserved component of eukaryotic ribonucleoprotein complexes that binds the 3' poly(U)-rich elements of nascent RNA polymerase III (pol III) transcripts to assist folding and maturation. This specific recognition is mediated by the N-terminal domain (NTD) of La, which comprises a La motif and an RNA recognition motif (RRM). We have determined the solution structures of both domains and show that the La motif adopts an alpha/beta fold that comprises a winged-helix motif elaborated by the insertion of three helices. Chemical shift mapping experiments show that these insertions are involved in RNA interactions. They further delineate a distinct surface patch on each domain-containing both basic and aromatic residues-that interacts with RNA and accounts for the cooperative binding of short oligonucleotides exhibited by the La NTD. | ||
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- | Structural analysis of cooperative RNA binding by the La motif and central RRM domain of human La protein.,Alfano C, Sanfelice D, Babon J, Kelly G, Jacks A, Curry S, Conte MR Nat Struct Mol Biol. 2004 Apr;11(4):323-9. Epub 2004 Mar 7. PMID:15004549<ref>PMID:15004549</ref> | ||
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- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 1s7a" style="background-color:#fffaf0;"></div> | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Alfano | + | [[Category: Alfano C]] |
- | [[Category: Babon | + | [[Category: Babon J]] |
- | [[Category: Conte | + | [[Category: Conte MR]] |
- | [[Category: Curry | + | [[Category: Curry S]] |
- | [[Category: Jacks | + | [[Category: Jacks A]] |
- | [[Category: Kelly | + | [[Category: Kelly G]] |
- | [[Category: Sanfelice | + | [[Category: Sanfelice D]] |
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Revision as of 08:29, 1 May 2024
NMR structure of the La motif of human La protein
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Categories: Homo sapiens | Large Structures | Alfano C | Babon J | Conte MR | Curry S | Jacks A | Kelly G | Sanfelice D