2ckl

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Current revision (09:26, 9 May 2024) (edit) (undo)
 
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<StructureSection load='2ckl' size='340' side='right'caption='[[2ckl]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='2ckl' size='340' side='right'caption='[[2ckl]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2ckl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CKL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CKL FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2ckl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CKL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CKL FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ckl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ckl OCA], [https://pdbe.org/2ckl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ckl RCSB], [https://www.ebi.ac.uk/pdbsum/2ckl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ckl ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ckl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ckl OCA], [https://pdbe.org/2ckl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ckl RCSB], [https://www.ebi.ac.uk/pdbsum/2ckl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ckl ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/BMI1_MOUSE BMI1_MOUSE]] Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. In the PRC1 complex, it is required to stimulate the E3 ubiquitin-protein ligase activity of RNF2/RING2 (By similarity).
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[https://www.uniprot.org/uniprot/BMI1_MOUSE BMI1_MOUSE] Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. In the PRC1 complex, it is required to stimulate the E3 ubiquitin-protein ligase activity of RNF2/RING2 (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
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*[[Polycomb complex proteins 3D structures|Polycomb complex proteins 3D structures]]
*[[Ubiquitin protein ligase 3D structures|Ubiquitin protein ligase 3D structures]]
*[[Ubiquitin protein ligase 3D structures|Ubiquitin protein ligase 3D structures]]
== References ==
== References ==
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Buchwald, G]]
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[[Category: Buchwald G]]
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[[Category: Lohuizen, M van]]
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[[Category: Perrakis A]]
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[[Category: Perrakis, A]]
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[[Category: Sixma TK]]
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[[Category: Sixma, T K]]
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[[Category: Weichenrieder O]]
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[[Category: Stoop, P van der]]
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[[Category: Van Lohuizen M]]
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[[Category: Weichenrieder, O]]
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[[Category: Van der Stoop P]]
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[[Category: Bmi1]]
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[[Category: Chromatin regulator]]
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[[Category: Chromosomal protein]]
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[[Category: E3-ligase]]
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[[Category: Ligase]]
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[[Category: Metal-binding]]
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[[Category: Nuclear protein]]
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[[Category: Polycomb]]
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[[Category: Proto-oncogene]]
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[[Category: Repressor]]
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[[Category: Ring domain]]
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[[Category: Ring1b]]
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[[Category: Transcription]]
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[[Category: Transcription regulation]]
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[[Category: Transcription regulation complex]]
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[[Category: Ubl conjugation pathway]]
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[[Category: Zinc-finger]]
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Current revision

Ring1b-Bmi1 E3 catalytic domain structure

PDB ID 2ckl

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