This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2woc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:15, 9 May 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2woc' size='340' side='right'caption='[[2woc]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
<StructureSection load='2woc' size='340' side='right'caption='[[2woc]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2woc]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/"dicrospirillum_rubrum"_enderlein_1925 "dicrospirillum rubrum" enderlein 1925]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WOC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WOC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2woc]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_rubrum Rhodospirillum rubrum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WOC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WOC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2wod|2wod]], [[2woe|2woe]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/ADP-ribosyl-[dinitrogen_reductase]_hydrolase ADP-ribosyl-[dinitrogen reductase] hydrolase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.2.24 3.2.2.24] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2woc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2woc OCA], [https://pdbe.org/2woc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2woc RCSB], [https://www.ebi.ac.uk/pdbsum/2woc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2woc ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2woc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2woc OCA], [https://pdbe.org/2woc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2woc RCSB], [https://www.ebi.ac.uk/pdbsum/2woc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2woc ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DRAG_RHORU DRAG_RHORU] Involved in the regulation of nitrogen fixation activity by the reversible ADP-ribosylation of one subunit of the homodimeric dinitrogenase reductase component of the nitrogenase enzyme complex. The ADP-ribosyltransferase (DraT) transfers the ADP-ribose group from NAD to dinitrogenase reductase. The ADP-ribose group is removed through the action of the ADP-ribosylglycohydrolase (DraG, this entry).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 32: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Dicrospirillum rubrum enderlein 1925]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Berthold, C L]]
+
[[Category: Rhodospirillum rubrum]]
-
[[Category: Hogbom, M]]
+
[[Category: Berthold CL]]
-
[[Category: Nordlund, S]]
+
[[Category: Hogbom M]]
-
[[Category: Wang, H]]
+
[[Category: Nordlund S]]
-
[[Category: Adp-ribosylglycohydrolase]]
+
[[Category: Wang H]]
-
[[Category: Dimanganese]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Mono-adp-ribosylhydrolase]]
+
-
[[Category: Nitrogen fixation]]
+

Current revision

Crystal Structure of the dinitrogenase reductase-activating glycohydrolase (DRAG) from Rhodospirillum rubrum

PDB ID 2woc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2woc"
Personal tools