This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4arj
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='4arj' size='340' side='right'caption='[[4arj]], [[Resolution|resolution]] 2.59Å' scene=''> | <StructureSection load='4arj' size='340' side='right'caption='[[4arj]], [[Resolution|resolution]] 2.59Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[4arj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[4arj]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4] and [https://en.wikipedia.org/wiki/Yersinia_pestis Yersinia pestis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4ARJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4ARJ FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.593Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4arj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4arj OCA], [https://pdbe.org/4arj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4arj RCSB], [https://www.ebi.ac.uk/pdbsum/4arj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4arj ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4arj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4arj OCA], [https://pdbe.org/4arj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4arj RCSB], [https://www.ebi.ac.uk/pdbsum/4arj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4arj ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ENLYS_BPT4 ENLYS_BPT4] Endolysin with lysozyme activity that degrades host peptidoglycans and participates with the holin and spanin proteins in the sequential events which lead to the programmed host cell lysis releasing the mature viral particles. Once the holin has permeabilized the host cell membrane, the endolysin can reach the periplasm and break down the peptidoglycan layer.<ref>PMID:22389108</ref> [https://www.uniprot.org/uniprot/Q57159_YERPE Q57159_YERPE] | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 25: | Line 26: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Escherichia virus T4]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Yersinia pestis]] |
| - | [[Category: Albrecht | + | [[Category: Albrecht R]] |
| - | [[Category: Braun | + | [[Category: Braun V]] |
| - | [[Category: Patzer | + | [[Category: Patzer SI]] |
| - | [[Category: Zeth | + | [[Category: Zeth K]] |
| - | + | ||
Current revision
Crystal structure of a pesticin (translocation and receptor binding domain) from Y. pestis and T4-lysozyme chimera
| |||||||||||
