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| <StructureSection load='1u5i' size='340' side='right'caption='[[1u5i]], [[Resolution|resolution]] 2.86Å' scene=''> | | <StructureSection load='1u5i' size='340' side='right'caption='[[1u5i]], [[Resolution|resolution]] 2.86Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[1u5i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U5I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U5I FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1u5i]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U5I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U5I FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1df0|1df0]], [[1qxp|1qxp]]</div></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.86Å</td></tr> |
- | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Calpain-2 Calpain-2], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.53 3.4.22.53] </span></td></tr>
| + | |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u5i OCA], [https://pdbe.org/1u5i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u5i RCSB], [https://www.ebi.ac.uk/pdbsum/1u5i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u5i ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u5i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u5i OCA], [https://pdbe.org/1u5i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u5i RCSB], [https://www.ebi.ac.uk/pdbsum/1u5i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u5i ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[https://www.uniprot.org/uniprot/CAN2_RAT CAN2_RAT]] Calcium-regulated non-lysosomal thiol-protease which catalyze limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction. [[https://www.uniprot.org/uniprot/CPNS1_RAT CPNS1_RAT]] Regulatory subunit of the calcium-regulated non-lysosomal thiol-protease which catalyzes limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction.
| + | [https://www.uniprot.org/uniprot/CAN2_RAT CAN2_RAT] Calcium-regulated non-lysosomal thiol-protease which catalyze limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction. |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Buffalo rat]] | |
- | [[Category: Calpain-2]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Elce, J S]] | + | [[Category: Rattus norvegicus]] |
- | [[Category: Hosfield, C M]] | + | [[Category: Elce JS]] |
- | [[Category: Jia, Z]] | + | [[Category: Hosfield CM]] |
- | [[Category: Pal, G P]] | + | [[Category: Jia Z]] |
- | [[Category: Calpain]] | + | [[Category: Pal GP]] |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Sulfhydryl protease]]
| + | |
| Structural highlights
Function
CAN2_RAT Calcium-regulated non-lysosomal thiol-protease which catalyze limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction.
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
The calpains are a family of cysteine proteases with closely related amino acid sequences, but a wide range of Ca(2+) requirements (K(d)). For m-calpain, K(d) is approximately 325microM, for mu-calpain it is approximately 50microM, and for calpain 3 it is not strictly known but may be approximately 0.1microM. On the basis of previous structure determination of m-calpain we postulated that two regions of the calpain large subunits, the N-terminal peptide (residues 1-20) and a domain III-IV linker peptide (residues 514-530 in m-calpain) were important in defining K(d). The mutations Lys10Thr in the N-terminal peptide, and Glu517Pro in the domain linker peptide, reduced K(d) of m-calpain by 30% and 42%, respectively, revealing that these two regions are functionally important. The increased Ca(2+)-sensitivity of these mutants demonstrate that the Lys10-Asp148 salt link and the short beta-sheet interaction involving Glu517 are factors contributing to the high K(d) of m-calpain. Though these two regions are physically remote from the active site and Ca(2+)-binding site, they play significant roles in regulating the response of calpain to Ca(2+). Differences in these interactions in mu-calpain and in calpain 3 are also consistent with their progressively lower K(d) values.
Activation of calpain by Ca2+: roles of the large subunit N-terminal and domain III-IV linker peptides.,Hosfield CM, Elce JS, Jia Z J Mol Biol. 2004 Oct 29;343(4):1049-53. PMID:15476820[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Hosfield CM, Elce JS, Jia Z. Activation of calpain by Ca2+: roles of the large subunit N-terminal and domain III-IV linker peptides. J Mol Biol. 2004 Oct 29;343(4):1049-53. PMID:15476820 doi:10.1016/j.jmb.2004.08.073
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