1wfl

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Current revision (13:36, 9 May 2024) (edit) (undo)
 
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==Solution structure of the zf-AN1 domain from mouse zinc finger protein 216==
==Solution structure of the zf-AN1 domain from mouse zinc finger protein 216==
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<StructureSection load='1wfl' size='340' side='right'caption='[[1wfl]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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<StructureSection load='1wfl' size='340' side='right'caption='[[1wfl]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1wfl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WFL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WFL FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1wfl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WFL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WFL FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RIKEN cDNA 2210411M18 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wfl OCA], [https://pdbe.org/1wfl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wfl RCSB], [https://www.ebi.ac.uk/pdbsum/1wfl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wfl ProSAT], [https://www.topsan.org/Proteins/RSGI/1wfl TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wfl OCA], [https://pdbe.org/1wfl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wfl RCSB], [https://www.ebi.ac.uk/pdbsum/1wfl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wfl ProSAT], [https://www.topsan.org/Proteins/RSGI/1wfl TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/ZFAN5_MOUSE ZFAN5_MOUSE]] Involved in protein degradation via the ubiquitin-proteasome system. May act by anchoring ubiquitinated proteins to the proteasome. Plays a role in ubiquitin-mediated protein degradation during muscle atrophy. Plays a role in the regulation of NF-kappa-B activation and apoptosis. Inhibits NF-kappa-B activation triggered by overexpression of RIPK1 and TRAF6 but not of RELA. Inhibits also tumor necrosis factor (TNF), IL-1 and TLR4-induced NF-kappa-B activation in a dose-dependent manner. Overexpression sensitizes cells to TNF-induced apoptosis. Is a potent inhibitory factor for osteoclast differentiation.<ref>PMID:16194934</ref> <ref>PMID:16424905</ref>
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[https://www.uniprot.org/uniprot/ZFAN5_MOUSE ZFAN5_MOUSE] Involved in protein degradation via the ubiquitin-proteasome system. May act by anchoring ubiquitinated proteins to the proteasome. Plays a role in ubiquitin-mediated protein degradation during muscle atrophy. Plays a role in the regulation of NF-kappa-B activation and apoptosis. Inhibits NF-kappa-B activation triggered by overexpression of RIPK1 and TRAF6 but not of RELA. Inhibits also tumor necrosis factor (TNF), IL-1 and TLR4-induced NF-kappa-B activation in a dose-dependent manner. Overexpression sensitizes cells to TNF-induced apoptosis. Is a potent inhibitory factor for osteoclast differentiation.<ref>PMID:16194934</ref> <ref>PMID:16424905</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lk3 transgenic mice]]
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[[Category: Mus musculus]]
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[[Category: Inoue, M]]
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[[Category: Inoue M]]
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[[Category: Kigawa, T]]
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[[Category: Kigawa T]]
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[[Category: Koshiba, S]]
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[[Category: Koshiba S]]
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[[Category: Structural genomic]]
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[[Category: Tomizawa T]]
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[[Category: Tomizawa, T]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S]]
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[[Category: Metal binding protein]]
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[[Category: Rsgi]]
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[[Category: Zf-an1 domain]]
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[[Category: Zinc binding]]
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[[Category: Zinc finger protein 216]]
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Current revision

Solution structure of the zf-AN1 domain from mouse zinc finger protein 216

PDB ID 1wfl

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