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| <StructureSection load='1xez' size='340' side='right'caption='[[1xez]], [[Resolution|resolution]] 2.30Å' scene=''> | | <StructureSection load='1xez' size='340' side='right'caption='[[1xez]], [[Resolution|resolution]] 2.30Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[1xez]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillo_virgola_del_koch"_trevisan_1884 "bacillo virgola del koch" trevisan 1884]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XEZ OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1XEZ FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1xez]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XEZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XEZ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HlyA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=666 "Bacillo virgola del Koch" Trevisan 1884])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BOG:B-OCTYLGLUCOSIDE'>BOG</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1xez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xez OCA], [http://pdbe.org/1xez PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xez RCSB], [http://www.ebi.ac.uk/pdbsum/1xez PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1xez ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xez FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xez OCA], [https://pdbe.org/1xez PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xez RCSB], [https://www.ebi.ac.uk/pdbsum/1xez PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xez ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/HLYA_VIBCH HLYA_VIBCH]] Bacterial hemolysin that causes cytolysis by forming heptameric pores in target host membranes.<ref>PMID:15978620</ref> | + | [https://www.uniprot.org/uniprot/HLYA_VIBCH HLYA_VIBCH] Bacterial hemolysin that causes cytolysis by forming heptameric pores in target host membranes.<ref>PMID:15978620</ref> |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bacillo virgola del koch trevisan 1884]] | |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Gouaux, E]] | + | [[Category: Vibrio cholerae]] |
- | [[Category: Olson, R]] | + | [[Category: Gouaux E]] |
- | [[Category: Beta-prism]] | + | [[Category: Olson R]] |
- | [[Category: Beta-trefoil]]
| + | |
- | [[Category: Cytolysin]]
| + | |
- | [[Category: Hemolysin]]
| + | |
- | [[Category: Pore-forming toxin]]
| + | |
- | [[Category: Pro-toxin]]
| + | |
- | [[Category: Toxin]]
| + | |
- | [[Category: Water-soluble monomer]]
| + | |
| Structural highlights
Function
HLYA_VIBCH Bacterial hemolysin that causes cytolysis by forming heptameric pores in target host membranes.[1]
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Pathogenic Vibrio cholerae secrete V. cholerae cytolysin (VCC), an 80 kDa pro-toxin that assembles into an oligomeric pore on target cell membranes following proteolytic cleavage and interaction with cell surface receptors. To gain insight into the activation and targeting activities of VCC, we solved the crystal structure of the pro-toxin at 2.3A by X-ray diffraction. The core cytolytic domain of VCC shares a fold similar to the staphylococcal pore-forming toxins, but in VCC an amino-terminal pro-domain and two carboxy-terminal lectin domains decorate the cytolytic domain. The pro-domain masks a protomer surface that likely participates in inter-protomer interactions in the cytolytic oligomer, thereby explaining why proteolytic cleavage and movement of the pro-domain is necessary for toxin activation. A single beta-octyl glucoside molecule outlines a possible receptor binding site on one lectin domain, and removal of this domain leads to a tenfold decrease in lytic activity toward rabbit erythrocytes. VCC activated by proteolytic cleavage assembles into an oligomeric species upon addition of soybean asolectin/cholesterol liposomes and this oligomer was purified in detergent micelles. Analytical ultracentrifugation and crystallographic analysis indicate that the resulting VCC oligomer is a heptamer. Taken together, these studies define the architecture of a pore forming toxin and associated lectin domains, confirm the stoichiometry of the assembled oligomer as heptameric, and suggest a common mechanism of assembly for staphylococcal and Vibrio cytolytic toxins.
Crystal structure of the Vibrio cholerae cytolysin (VCC) pro-toxin and its assembly into a heptameric transmembrane pore.,Olson R, Gouaux E J Mol Biol. 2005 Jul 29;350(5):997-1016. PMID:15978620[2]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Olson R, Gouaux E. Crystal structure of the Vibrio cholerae cytolysin (VCC) pro-toxin and its assembly into a heptameric transmembrane pore. J Mol Biol. 2005 Jul 29;350(5):997-1016. PMID:15978620 doi:10.1016/j.jmb.2005.05.045
- ↑ Olson R, Gouaux E. Crystal structure of the Vibrio cholerae cytolysin (VCC) pro-toxin and its assembly into a heptameric transmembrane pore. J Mol Biol. 2005 Jul 29;350(5):997-1016. PMID:15978620 doi:10.1016/j.jmb.2005.05.045
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