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1xqb

From Proteopedia

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Current revision (07:56, 15 May 2024) (edit) (undo)
 
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<StructureSection load='1xqb' size='340' side='right'caption='[[1xqb]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
<StructureSection load='1xqb' size='340' side='right'caption='[[1xqb]], [[Resolution|resolution]] 2.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1xqb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacterium_influenzae"_lehmann_and_neumann_1896 "bacterium influenzae" lehmann and neumann 1896]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XQB FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1xqb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_influenzae Haemophilus influenzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XQB FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.85&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yaeb ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=727 "Bacterium influenzae" Lehmann and Neumann 1896])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xqb OCA], [https://pdbe.org/1xqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xqb RCSB], [https://www.ebi.ac.uk/pdbsum/1xqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xqb ProSAT], [https://www.topsan.org/Proteins/NESGC/1xqb TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xqb OCA], [https://pdbe.org/1xqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xqb RCSB], [https://www.ebi.ac.uk/pdbsum/1xqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xqb ProSAT], [https://www.topsan.org/Proteins/NESGC/1xqb TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/TSAA_HAEIN TSAA_HAEIN]] Is likely the methyltransferase responsible for the addition of the methyl group in the formation of N6-methyl-N6-threonylcarbamoyladenosine at position 37 (m6t6A37) in some tRNAs species that read codons starting with adenosine.
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[https://www.uniprot.org/uniprot/TRMO_HAEIN TRMO_HAEIN] S-adenosyl-L-methionine-dependent methyltransferase responsible for the addition of the methyl group in the formation of N6-methyl-N6-threonylcarbamoyladenosine at position 37 (m(6)t(6)A37) of the tRNA anticodon loop of tRNA(Thr)(GGU). The methyl group of m(6)t(6)A37 appears to slightly improve the efficiency of the tRNA decoding ability. Binds to tRNA.[UniProtKB:P28634]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Bacterium influenzae lehmann and neumann 1896]]
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[[Category: Haemophilus influenzae]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Acton, T]]
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[[Category: Acton T]]
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[[Category: Benach, J]]
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[[Category: Benach J]]
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[[Category: Forouhar, F]]
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[[Category: Forouhar F]]
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[[Category: Hunt, J F]]
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[[Category: Hunt JF]]
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[[Category: Itkin, A]]
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[[Category: Itkin A]]
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[[Category: Keller, J P]]
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[[Category: Keller JP]]
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[[Category: Kuzin, A P]]
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[[Category: Kuzin AP]]
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[[Category: Lee, I]]
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[[Category: Lee I]]
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[[Category: Montelione, G T]]
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[[Category: Montelione GT]]
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[[Category: Structural genomic]]
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[[Category: Xiao R]]
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[[Category: Xiao, R]]
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[[Category: Nesg]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Unknown function]]
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Current revision

X-Ray Structure Of YaeB from Haemophilus influenzae. Northeast Structural Genomics Research Consortium (NESGC)target IR47.

PDB ID 1xqb

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