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| | ==NMR Structure of N-terminal domain (Residues 1-77) of Siah-Interacting Protein.== | | ==NMR Structure of N-terminal domain (Residues 1-77) of Siah-Interacting Protein.== |
| - | <StructureSection load='1ysm' size='340' side='right'caption='[[1ysm]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='1ysm' size='340' side='right'caption='[[1ysm]]' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[1ysm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YSM FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[1ysm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YSM FirstGlance]. <br> |
| - | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Cacybp, Sip ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ysm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ysm OCA], [https://pdbe.org/1ysm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ysm RCSB], [https://www.ebi.ac.uk/pdbsum/1ysm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ysm ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ysm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ysm OCA], [https://pdbe.org/1ysm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ysm RCSB], [https://www.ebi.ac.uk/pdbsum/1ysm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ysm ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[https://www.uniprot.org/uniprot/CYBP_MOUSE CYBP_MOUSE]] May be involved in calcium-dependent ubiquitination and subsequent proteasomal degradation of target proteins. Probably serves as a molecular bridge in ubiquitin E3 complexes. Participates in the ubiquitin-mediated degradation of beta-catenin (CTNNB1) (By similarity).
| + | [https://www.uniprot.org/uniprot/CYBP_MOUSE CYBP_MOUSE] May be involved in calcium-dependent ubiquitination and subsequent proteasomal degradation of target proteins. Probably serves as a molecular bridge in ubiquitin E3 complexes. Participates in the ubiquitin-mediated degradation of beta-catenin (CTNNB1) (By similarity). |
| | == Evolutionary Conservation == | | == Evolutionary Conservation == |
| | [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| | </StructureSection> | | </StructureSection> |
| | [[Category: Large Structures]] | | [[Category: Large Structures]] |
| - | [[Category: Lk3 transgenic mice]] | + | [[Category: Mus musculus]] |
| - | [[Category: Bhattacharya, S]] | + | [[Category: Bhattacharya S]] |
| - | [[Category: Chazin, W J]] | + | [[Category: Chazin WJ]] |
| - | [[Category: Filipek, A]] | + | [[Category: Filipek A]] |
| - | [[Category: Jastrzebska, B]] | + | [[Category: Jastrzebska B]] |
| - | [[Category: Kuznicki, J]] | + | [[Category: Kuznicki J]] |
| - | [[Category: Lee, Y T]] | + | [[Category: Lee YT]] |
| - | [[Category: Michowski, W]] | + | [[Category: Michowski W]] |
| - | [[Category: Helix-turn-helix]]
| + | |
| - | [[Category: Metal binding protein]]
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| Structural highlights
Function
CYBP_MOUSE May be involved in calcium-dependent ubiquitination and subsequent proteasomal degradation of target proteins. Probably serves as a molecular bridge in ubiquitin E3 complexes. Participates in the ubiquitin-mediated degradation of beta-catenin (CTNNB1) (By similarity).
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
Siah-interacting protein (SIP) was identified as a novel adaptor that physically links the E3 ubiquitin ligase activity of Siah-1 with Skp1 and Ebi F-Box protein in the degradation of beta-catenin, a transcriptional activator of TCF/LEF genes. In this study, we have used solution NMR spectroscopy to characterize the domain structure of SIP, which includes a novel helical hairpin domain at the N-terminus flexibly linked to a CS domain and an unstructured carboxy terminal SGS domain. These studies have been complemented by mapping the sites of functionally important protein-protein interactions involving Siah-1 and Skp1 to individual domains of SIP. NMR-based chemical shift perturbation assays show that Siah-1 interacts with the flexible linker between SIP N and CS domains. This site for interaction in the linker does not perturb residues in the structured region at the N-terminus but does appear to restrict the rotational freedom of the SIP CS domain in the context of the full-length protein. In contrast, Skp1 engages the SIP CS domain exclusively through weak interactions that are not coupled to the other domains. The principal role of the modular structure of SIP appears to be in bringing these two proteins into physical proximity and orchestrating the orientation required for polyubiquitination of beta-catenin in the intact SCF-type complex.
The modular structure of SIP facilitates its role in stabilizing multiprotein assemblies.,Bhattacharya S, Lee YT, Michowski W, Jastrzebska B, Filipek A, Kuznicki J, Chazin WJ Biochemistry. 2005 Jul 12;44(27):9462-71. PMID:15996101[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Bhattacharya S, Lee YT, Michowski W, Jastrzebska B, Filipek A, Kuznicki J, Chazin WJ. The modular structure of SIP facilitates its role in stabilizing multiprotein assemblies. Biochemistry. 2005 Jul 12;44(27):9462-71. PMID:15996101 doi:10.1021/bi0502689
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