1s8f

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[[Image:1s8f.gif|left|200px]]
[[Image:1s8f.gif|left|200px]]
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{{Structure
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<!--
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|PDB= 1s8f |SIZE=350|CAPTION= <scene name='initialview01'>1s8f</scene>, resolution 1.77&Aring;
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The line below this paragraph, containing "STRUCTURE_1s8f", creates the "Structure Box" on the page.
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|SITE=
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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|LIGAND= <scene name='pdbligand=BEZ:BENZOIC+ACID'>BEZ</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GDP:GUANOSINE-5&#39;-DIPHOSPHATE'>GDP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SR:STRONTIUM+ION'>SR</scene>
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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|ACTIVITY=
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or leave the SCENE parameter empty for the default display.
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|GENE= RAB9A, RAB9 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9615 Canis lupus familiaris])
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-->
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|DOMAIN=
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{{STRUCTURE_1s8f| PDB=1s8f | SCENE= }}
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1s8f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s8f OCA], [http://www.ebi.ac.uk/pdbsum/1s8f PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1s8f RCSB]</span>
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}}
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'''Crystal structure of Rab9 complexed to GDP reveals a dimer with an active conformation of switch II'''
'''Crystal structure of Rab9 complexed to GDP reveals a dimer with an active conformation of switch II'''
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[[Category: Rudolph, M G.]]
[[Category: Rudolph, M G.]]
[[Category: Wittmann, J G.]]
[[Category: Wittmann, J G.]]
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[[Category: hemihedral twinning]]
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[[Category: Hemihedral twinning]]
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[[Category: intracellular transport]]
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[[Category: Intracellular transport]]
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[[Category: vesicular trafficking]]
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[[Category: Vesicular trafficking]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 08:25:27 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:38:49 2008''
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Revision as of 05:25, 3 May 2008

Template:STRUCTURE 1s8f

Crystal structure of Rab9 complexed to GDP reveals a dimer with an active conformation of switch II


Overview

The small GTPase Rab9 is an essential regulator of vesicular transport from the late endosome to the trans-Golgi network, as monitored by the redirection of the mannose-6-phosphate receptors. The crystal structure of Rab9 complexed to GDP, Mg(2+), and Sr(2+) reveals a unique dimer formed by an intermolecular beta-sheet that buries the switch I regions. Surface area and shape complementarity calculations suggest that Rab9 dimers can form an inactive, membrane-bound pool of Rab9 . GDP that is independent of GDI. Mg(2+)-bound Rab9 represents an inactive state, but Sr(2+)-bound Rab9 . GDP displays activated switch region conformations, mimicking those of the GTP state. A hydrophobic tetrad is formed resembling an effector-discriminating epitope found only in GTP-bound Rab proteins.

About this Structure

1S8F is a Single protein structure of sequence from Canis lupus familiaris. Full crystallographic information is available from OCA.

Reference

Crystal structure of Rab9 complexed to GDP reveals a dimer with an active conformation of switch II., Wittmann JG, Rudolph MG, FEBS Lett. 2004 Jun 18;568(1-3):23-9. PMID:15196914 Page seeded by OCA on Sat May 3 08:25:27 2008

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