6sih

From Proteopedia

(Difference between revisions)

Current revision

Structure of bacterial flagellar capping protein FliD

Structural highlights

6sih is a 10 chain structure with sequence from Campylobacter jejuni. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	Electron Microscopy, Resolution 4.7Å
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A3I4YJR7_CAMJU Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.[RuleBase:RU362066]

Publication Abstract from PubMed

The bacterial flagellum is a remarkable molecular motor, whose primary function in bacteria is to facilitate motility through the rotation of a filament protruding from the bacterial cell. A cap complex, consisting of an oligomer of the protein FliD, is localized at the tip of the flagellum, and is essential for filament assembly, as well as adherence to surfaces in some bacteria. However, the structure of the intact cap complex, and the molecular basis for its interaction with the filament, remains elusive. Here we report the cryo-EM structure of the Campylobacter jejuni cap complex, which reveals that FliD is pentameric, with the N-terminal region of the protomer forming an extensive set of contacts across several subunits, that contribute to FliD oligomerization. We also demonstrate that the native C. jejuni flagellum filament is 11-stranded, contrary to a previously published cryo-EM structure, and propose a molecular model for the filament-cap interaction.

The cryo-EM structure of the bacterial flagellum cap complex suggests a molecular mechanism for filament elongation.,Al-Otaibi NS, Taylor AJ, Farrell DP, Tzokov SB, DiMaio F, Kelly DJ, Bergeron JRC Nat Commun. 2020 Jun 25;11(1):3210. doi: 10.1038/s41467-020-16981-4. PMID:32587243^[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

↑ Al-Otaibi NS, Taylor AJ, Farrell DP, Tzokov SB, DiMaio F, Kelly DJ, Bergeron JRC. The cryo-EM structure of the bacterial flagellum cap complex suggests a molecular mechanism for filament elongation. Nat Commun. 2020 Jun 25;11(1):3210. doi: 10.1038/s41467-020-16981-4. PMID:32587243 doi:http://dx.doi.org/10.1038/s41467-020-16981-4

1 Structural highlights
2 Function
3 Publication Abstract from PubMed
4 See Also
5 References

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6sih"

@@ Line 3: / Line 3: @@
 <StructureSection load='6sih' size='340' side='right'caption='[[6sih]], [[Resolution|resolution]] 4.70&Aring;' scene=''>
 == Structural highlights ==
-<table><tr><td colspan='2'>[[6sih]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/"campylobacter_fetus_subsp._jejuni"_smibert_1974 "campylobacter fetus subsp. jejuni" smibert 1974]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SIH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SIH FirstGlance]. <br>
+<table><tr><td colspan='2'>[[6sih]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SIH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SIH FirstGlance]. <br>
-</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">fliD, EC071_02365 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 "Campylobacter fetus subsp. jejuni" Smibert 1974])</td></tr>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.7&#8491;</td></tr>
 <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6sih FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6sih OCA], [https://pdbe.org/6sih PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6sih RCSB], [https://www.ebi.ac.uk/pdbsum/6sih PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6sih ProSAT]</span></td></tr>
 </table>
 == Function ==
-[[https://www.uniprot.org/uniprot/A0A3I4YJR7_CAMJU A0A3I4YJR7_CAMJU]] Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.[RuleBase:RU362066]
+[https://www.uniprot.org/uniprot/A0A3I4YJR7_CAMJU A0A3I4YJR7_CAMJU] Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.[RuleBase:RU362066]
 <div style="background-color:#fffaf0;">
 == Publication Abstract from PubMed ==
@@ Line 25: / Line 25: @@
 __TOC__
 </StructureSection>
-[[Category: Campylobacter fetus subsp. jejuni smibert 1974]]
-[[Category: Large Structures]]
-[[Category: Al-Otaibi, N S]]
-[[Category: Bergeron, J R.C]]
-[[Category: DiMaio, F]]
-[[Category: Farrell, D]]
-[[Category: C jejuni]]
 [[Category: Campylobacter jejuni]]
-[[Category: Flagella]]
+[[Category: Large Structures]]
-[[Category: Flagellum]]
+[[Category: Al-Otaibi NS]]
-[[Category: Flid]]
+[[Category: Bergeron JRC]]
-[[Category: Hap2]]
+[[Category: DiMaio F]]
-[[Category: Transport protein]]
+[[Category: Farrell D]]

6sih

From Proteopedia

Current revision

Structure of bacterial flagellar capping protein FliD

Structural highlights

Function

Publication Abstract from PubMed

See Also

References

Contents

Proteopedia Page Contributors and Editors (what is this?)

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