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| <StructureSection load='6ski' size='340' side='right'caption='[[6ski]], [[Resolution|resolution]] 2.60Å' scene=''> | | <StructureSection load='6ski' size='340' side='right'caption='[[6ski]], [[Resolution|resolution]] 2.60Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6ski]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SKI OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6SKI FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6ski]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6SKI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6SKI FirstGlance]. <br> |
- | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NCTC12950_00913, NCTC9044_02520 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895]), vgrG, DL654_23170, DM280_18435, EF082_25505, EHD42_22735, EIT12_22235, EIT27_22025, NCTC9044_02519 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.6Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ski FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ski OCA], [http://pdbe.org/6ski PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ski RCSB], [http://www.ebi.ac.uk/pdbsum/6ski PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ski ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ski FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ski OCA], [https://pdbe.org/6ski PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ski RCSB], [https://www.ebi.ac.uk/pdbsum/6ski PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ski ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A377LA80_ECOLX A0A377LA80_ECOLX] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bacillus coli migula 1895]] | + | [[Category: Escherichia coli]] |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Fronzes, R]] | + | [[Category: Fronzes R]] |
- | [[Category: Rapisarda, C]] | + | [[Category: Rapisarda C]] |
- | [[Category: Effector]]
| + | |
- | [[Category: Hydrolase]]
| + | |
- | [[Category: Lipase]]
| + | |
- | [[Category: Toxin]]
| + | |
| Structural highlights
Function
A0A377LA80_ECOLX
Publication Abstract from PubMed
The bacterial type VI secretion system (T6SS) is a macromolecular machine that injects effectors into prokaryotic and eukaryotic cells. The mode of action of the T6SS is similar to contractile phages: the contraction of a sheath structure pushes a tube topped by a spike into target cells. Effectors are loaded onto the spike or confined into the tube. In enteroaggregative Escherichia coli, the Tle1 phospholipase binds the C-terminal extension of the VgrG trimeric spike. Here, we purify the VgrG-Tle1 complex and show that a VgrG trimer binds three Tle1 monomers and inhibits their activity. Using covalent cross-linking coupled to high-resolution mass spectrometry, we provide information on the sites of contact and further identify the requirement for a Tle1 N-terminal secretion sequence in complex formation. Finally, we report the 2.6-A-resolution cryo-electron microscopy tri-dimensional structure of the (VgrG)3 -(Tle1)3 complex revealing how the effector binds its cargo, and how VgrG inhibits Tle1 phospholipase activity. The inhibition of Tle1 phospholipase activity once bound to VgrG suggests that Tle1 dissociation from VgrG is required upon delivery.
Structural basis for loading and inhibition of a bacterial T6SS phospholipase effector by the VgrG spike.,Flaugnatti N, Rapisarda C, Rey M, Beauvois SG, Nguyen VA, Canaan S, Durand E, Chamot-Rooke J, Cascales E, Fronzes R, Journet L EMBO J. 2020 Jun 2;39(11):e104129. doi: 10.15252/embj.2019104129. Epub 2020 Apr, 30. PMID:32350888[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Flaugnatti N, Rapisarda C, Rey M, Beauvois SG, Nguyen VA, Canaan S, Durand E, Chamot-Rooke J, Cascales E, Fronzes R, Journet L. Structural basis for loading and inhibition of a bacterial T6SS phospholipase effector by the VgrG spike. EMBO J. 2020 Jun 2;39(11):e104129. doi: 10.15252/embj.2019104129. Epub 2020 Apr, 30. PMID:32350888 doi:http://dx.doi.org/10.15252/embj.2019104129
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