7lcc
From Proteopedia
(Difference between revisions)
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- | ==== | + | ==Helitron transposase bound to LTS== |
- | <StructureSection load='7lcc' size='340' side='right'caption='[[7lcc]]' scene=''> | + | <StructureSection load='7lcc' size='340' side='right'caption='[[7lcc]], [[Resolution|resolution]] 3.66Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7lcc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Myotis_lucifugus Myotis lucifugus] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7LCC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7LCC FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lcc OCA], [https://pdbe.org/7lcc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lcc RCSB], [https://www.ebi.ac.uk/pdbsum/7lcc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lcc ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.66Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7lcc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7lcc OCA], [https://pdbe.org/7lcc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7lcc RCSB], [https://www.ebi.ac.uk/pdbsum/7lcc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7lcc ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Helitrons are widespread eukaryotic DNA transposons that have significantly contributed to genome variability and evolution, in part because of their distinctive, replicative rolling-circle mechanism, which often mobilizes adjacent genes. Although most eukaryotic transposases form oligomers and use RNase H-like domains to break and rejoin double-stranded DNA (dsDNA), Helitron transposases contain a single-stranded DNA (ssDNA)-specific HUH endonuclease domain. Here, we report the cryo-electron microscopy structure of a Helitron transposase bound to the 5'-transposon end, providing insight into its multidomain architecture and function. The monomeric transposase forms a tightly packed assembly that buries the covalently attached cleaved end, protecting it until the second end becomes available. The structure reveals unexpected architectural similarity to TraI, a bacterial relaxase that also catalyzes ssDNA movement. The HUH active site suggests how two juxtaposed tyrosines, a feature of many replication initiators that use HUH nucleases, couple the conformational shift of an alpha-helix to control strand cleavage and ligation reactions. | ||
+ | |||
+ | The large bat Helitron DNA transposase forms a compact monomeric assembly that buries and protects its covalently bound 5'-transposon end.,Kosek D, Grabundzija I, Lei H, Bilic I, Wang H, Jin Y, Peaslee GF, Hickman AB, Dyda F Mol Cell. 2021 Oct 21;81(20):4271-4286.e4. doi: 10.1016/j.molcel.2021.07.028. , Epub 2021 Aug 16. PMID:34403695<ref>PMID:34403695</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7lcc" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Transposase 3D structures|Transposase 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Myotis lucifugus]] |
+ | [[Category: Synthetic construct]] | ||
+ | [[Category: Dyda F]] | ||
+ | [[Category: Kosek D]] |
Current revision
Helitron transposase bound to LTS
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