7mry

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Current revision (19:40, 29 May 2024) (edit) (undo)
 
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<StructureSection load='7mry' size='340' side='right'caption='[[7mry]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
<StructureSection load='7mry' size='340' side='right'caption='[[7mry]], [[Resolution|resolution]] 3.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[7mry]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Norovirus_GII.4 Norovirus GII.4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7MRY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7MRY FirstGlance]. <br>
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7MRY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7MRY FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7mry FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7mry OCA], [https://pdbe.org/7mry PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7mry RCSB], [https://www.ebi.ac.uk/pdbsum/7mry PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7mry ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7mry FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7mry OCA], [https://pdbe.org/7mry PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7mry RCSB], [https://www.ebi.ac.uk/pdbsum/7mry PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7mry ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
 
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[https://www.uniprot.org/uniprot/A9YYE4_9CALI A9YYE4_9CALI]
 
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Human noroviruses (HuNoVs) cause sporadic and epidemic viral gastroenteritis worldwide. The GII.4 variants are responsible for most HuNoV infections, and GII.4 virus-like particles (VLPs) are being used in vaccine development. The atomic structure of the GII.4 capsid in the native T = 3 state has not been determined. Here we present the GII.4 VLP structure with T = 3 symmetry determined using X-ray crystallography and cryo-EM at 3.0 A and 3.8 A resolution, respectively, which reveals unanticipated novel features. A novel aspect in the crystal structure determined without imposing icosahedral symmetry is the remarkable adaptability of the capsid protein VP1 driven by the flexible hinge between the shell and the protruding domains. In both crystal and cryo-EM structures, VP1 adopts a stable conformation with the protruding domain resting on the shell domain, in contrast to the 'rising' conformation observed in recent cryo-EM structures of other GII.4 VLPs. Our studies further revealed that the resting state of VP1 dimer is stabilized by a divalent ion, and chelation using EDTA increases capsid diameter, exposing new hydrophobic and antigenic sites and suggesting a transition to the rising conformation. These novel insights into GII.4 capsid structure, stability, and antigen presentation may be useful for ongoing vaccine development.
 
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Atomic structure of the predominant GII.4 human norovirus capsid reveals novel stability and plasticity.,Hu L, Salmen W, Chen R, Zhou Y, Neill F, Crowe JE Jr, Atmar RL, Estes MK, Prasad BVV Nat Commun. 2022 Mar 10;13(1):1241. doi: 10.1038/s41467-022-28757-z. PMID:35273142<ref>PMID:35273142</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 7mry" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Norovirus GII 4]]
 
[[Category: Hu L]]
[[Category: Hu L]]
[[Category: Prasad B]]
[[Category: Prasad B]]
[[Category: Salmen W]]
[[Category: Salmen W]]

Current revision

Norovirus T=3 GII.4 HOV VLP

PDB ID 7mry

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