8r74

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:18, 5 June 2024) (edit) (undo)
 
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 8r74 is ON HOLD until Paper Publication
+
==Galectin-1 in complex with thiogalactoside derivative==
 +
<StructureSection load='8r74' size='340' side='right'caption='[[8r74]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[8r74]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8R74 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8R74 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=YBC:(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(3,4-dichlorophenyl)sulfanyl-6-(hydroxymethyl)-4-[4-(2-oxidanyl-1,3-thiazol-4-yl)-1,2,3-triazol-1-yl]oxane-3,5-diol'>YBC</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8r74 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8r74 OCA], [https://pdbe.org/8r74 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8r74 RCSB], [https://www.ebi.ac.uk/pdbsum/8r74 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8r74 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LEG1_HUMAN LEG1_HUMAN] May regulate apoptosis, cell proliferation and cell differentiation. Binds beta-galactoside and a wide array of complex carbohydrates. Inhibits CD45 protein phosphatase activity and therefore the dephosphorylation of Lyn kinase.<ref>PMID:14617626</ref> <ref>PMID:18796645</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
We have previously described a new series of selective and orally available galectin-1 inhibitors resulting in the thiazole-containing glycomimetic GB1490. Here, we show that the introduction of polar substituents to the thiazole ring results in galectin-1-specific compounds with low nM affinities. X-ray structural analysis of a new ligand-galectin-1 complex shows changes in the binding mode and ligand-protein hydrogen bond interactions compared to the GB1490-galectin-1 complex. These new high affinity ligands were further optimized with respect to affinity and ADME properties resulting in the galectin-1-selective GB1908 (K(d) galectin-1/3 0.057/6.0 muM). In vitro GB1908 inhibited galectin-1-induced apoptosis in Jurkat cells (IC(50) = 850 nM). Pharmacokinetic experiments in mice revealed that a dose of 30 mg/kg b.i.d. results in free levels of GB1908 in plasma over galectin-1 K(d) for 24 h. GB1908 dosed with this regimen reduced the growth of primary lung tumor LL/2 in a syngeneic mouse model.
-
Authors: Hakansson, M., Diehl, C., Peterson, K., Zetterberg, F., Nilsson, U.
+
Discovery of the Selective and Orally Available Galectin-1 Inhibitor GB1908 as a Potential Treatment for Lung Cancer.,Zetterberg FR, Peterson K, Nilsson UJ, Andreasson Dahlgren K, Diehl C, Holyer I, Hakansson M, Khabut A, Kahl-Knutson B, Leffler H, MacKinnon AC, Roper JA, Slack RJ, Zarrizi R, Pedersen A J Med Chem. 2024 May 28. doi: 10.1021/acs.jmedchem.4c00485. PMID:38804039<ref>PMID:38804039</ref>
-
Description: Galectin-1 in complex with thiogalactoside derivative
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Peterson, K]]
+
<div class="pdbe-citations 8r74" style="background-color:#fffaf0;"></div>
-
[[Category: Nilsson, U]]
+
== References ==
-
[[Category: Zetterberg, F]]
+
<references/>
-
[[Category: Diehl, C]]
+
__TOC__
-
[[Category: Hakansson, M]]
+
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Diehl C]]
 +
[[Category: Hakansson M]]
 +
[[Category: Nilsson U]]
 +
[[Category: Peterson K]]
 +
[[Category: Zetterberg F]]

Current revision

Galectin-1 in complex with thiogalactoside derivative

PDB ID 8r74

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools