7nal
From Proteopedia
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<StructureSection load='7nal' size='340' side='right'caption='[[7nal]], [[Resolution|resolution]] 3.00Å' scene=''> | <StructureSection load='7nal' size='340' side='right'caption='[[7nal]], [[Resolution|resolution]] 3.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7NAL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7NAL FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NMN:BETA-NICOTINAMIDE+RIBOSE+MONOPHOSPHATE'>NMN</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NMN:BETA-NICOTINAMIDE+RIBOSE+MONOPHOSPHATE'>NMN</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7nal FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7nal OCA], [https://pdbe.org/7nal PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7nal RCSB], [https://www.ebi.ac.uk/pdbsum/7nal PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7nal ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7nal FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7nal OCA], [https://pdbe.org/7nal PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7nal RCSB], [https://www.ebi.ac.uk/pdbsum/7nal PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7nal ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | == Function == | ||
- | [[https://www.uniprot.org/uniprot/SARM1_HUMAN SARM1_HUMAN]] Negative regulator of MYD88- and TRIF-dependent toll-like receptor signaling pathway which plays a pivotal role in activating axonal degeneration following injury. Promotes Wallerian degeneration an injury-induced axonal death pathway which involves degeneration of an axon distal to the injury site. Can activate neuronal death in response to stress. Regulates dendritic arborization through the MAPK4-JNK pathway. Involved in innate immune response. Inhibits both TICAM1/TRIF- and MYD88-dependent activation of JUN/AP-1, TRIF-dependent activation of NF-kappa-B and IRF3, and the phosphorylation of MAPK14/p38.<ref>PMID:15123841</ref> <ref>PMID:16964262</ref> <ref>PMID:16985498</ref> <ref>PMID:20306472</ref> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | The NADase SARM1 (sterile alpha and TIR motif containing 1) is a key executioner of axon degeneration and a therapeutic target for several neurodegenerative conditions. We show that a potent SARM1 inhibitor undergoes base exchange with the nicotinamide moiety of nicotinamide adenine dinucleotide (NAD(+)) to produce the bona fide inhibitor 1AD. We report structures of SARM1 in complex with 1AD, NAD(+) mimetics and the allosteric activator nicotinamide mononucleotide (NMN). NMN binding triggers reorientation of the armadillo repeat (ARM) domains, which disrupts ARM:TIR interactions and leads to formation of a two-stranded TIR domain assembly. The active site spans two molecules in these assemblies, explaining the requirement of TIR domain self-association for NADase activity and axon degeneration. Our results reveal the mechanisms of SARM1 activation and substrate binding, providing rational avenues for the design of new therapeutics targeting SARM1. | ||
- | + | ==See Also== | |
- | + | *[[SARM1 3D structures|SARM1 3D structures]] | |
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Adams | + | [[Category: Adams S]] |
- | [[Category: Bosanac | + | [[Category: Bosanac T]] |
- | [[Category: Cunnea | + | [[Category: Cunnea K]] |
- | [[Category: Hughes | + | [[Category: Hughes RO]] |
- | [[Category: Kerry | + | [[Category: Kerry PS]] |
- | [[Category: Kobe | + | [[Category: Kobe B]] |
- | [[Category: Nanson | + | [[Category: Nanson JD]] |
- | [[Category: Ve | + | [[Category: Ve T]] |
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Current revision
Cryo-EM structure of activated human SARM1 in complex with NMN and 1AD (ARM and SAM domains)
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Categories: Large Structures | Adams S | Bosanac T | Cunnea K | Hughes RO | Kerry PS | Kobe B | Nanson JD | Ve T