7r6n
From Proteopedia
(Difference between revisions)
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<StructureSection load='7r6n' size='340' side='right'caption='[[7r6n]], [[Resolution|resolution]] 4.10Å' scene=''> | <StructureSection load='7r6n' size='340' side='right'caption='[[7r6n]], [[Resolution|resolution]] 4.10Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7R6N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7R6N FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 4.1Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7r6n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7r6n OCA], [https://pdbe.org/7r6n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7r6n RCSB], [https://www.ebi.ac.uk/pdbsum/7r6n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7r6n ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7r6n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7r6n OCA], [https://pdbe.org/7r6n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7r6n RCSB], [https://www.ebi.ac.uk/pdbsum/7r6n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7r6n ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| - | <div style="background-color:#fffaf0;"> | ||
| - | == Publication Abstract from PubMed == | ||
| - | High-resolution structural studies are essential for understanding the folding and function of diverse RNAs. Herein, we present a nanoarchitectural engineering strategy for efficient structural determination of RNA-only structures using single-particle cryogenic electron microscopy (cryo-EM). This strategy-ROCK (RNA oligomerization-enabled cryo-EM via installing kissing loops)-involves installing kissing-loop sequences onto the functionally nonessential stems of RNAs for homomeric self-assembly into closed rings with multiplied molecular weights and mitigated structural flexibility. ROCK enables cryo-EM reconstruction of the Tetrahymena group I intron at 2.98-A resolution overall (2.85 A for the core), allowing de novo model building of the complete RNA, including the previously unknown peripheral domains. ROCK is further applied to two smaller RNAs-the Azoarcus group I intron and the FMN riboswitch, revealing the conformational change of the former and the bound ligand in the latter. ROCK holds promise to greatly facilitate the use of cryo-EM in RNA structural studies. | ||
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| - | Sub-3-A cryo-EM structure of RNA enabled by engineered homomeric self-assembly.,Liu D, Thelot FA, Piccirilli JA, Liao M, Yin P Nat Methods. 2022 May 2. pii: 10.1038/s41592-022-01455-w. doi:, 10.1038/s41592-022-01455-w. PMID:35501384<ref>PMID:35501384</ref> | ||
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| - | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| - | </div> | ||
| - | <div class="pdbe-citations 7r6n" style="background-color:#fffaf0;"></div> | ||
| - | == References == | ||
| - | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Liao | + | [[Category: Liao M]] |
| - | [[Category: Liu | + | [[Category: Liu D]] |
| - | [[Category: Thelot | + | [[Category: Thelot F]] |
| - | [[Category: Yin | + | [[Category: Yin P]] |
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Current revision
Exon-free state of the Tetrahymena group I intron, symmetry-expanded monomer from a synthetic trimeric construct
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Categories: Large Structures | Liao M | Liu D | Thelot F | Yin P
