7rlo

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Current revision (05:47, 5 June 2024) (edit) (undo)
 
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==Structure of the human eukaryotic translation initiation factor 2B (eIF2B) in complex with a viral protein NSs==
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<StructureSection load='7rlo' size='340' side='right'caption='[[7rlo]]' scene=''>
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<StructureSection load='7rlo' size='340' side='right'caption='[[7rlo]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br>
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<table><tr><td colspan='2'>[[7rlo]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Sandfly_fever_Sicilian_virus Sandfly fever Sicilian virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7RLO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7RLO FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rlo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rlo OCA], [https://pdbe.org/7rlo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rlo RCSB], [https://www.ebi.ac.uk/pdbsum/7rlo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rlo ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7rlo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7rlo OCA], [https://pdbe.org/7rlo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7rlo RCSB], [https://www.ebi.ac.uk/pdbsum/7rlo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7rlo ProSAT]</span></td></tr>
</table>
</table>
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== Disease ==
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[https://www.uniprot.org/uniprot/EI2BE_HUMAN EI2BE_HUMAN] Defects in EIF2B5 are a cause of leukodystrophy with vanishing white matter (VWM) [MIM:[https://omim.org/entry/603896 603896]. VWM is a leukodystrophy that occurs mainly in children. Neurological signs include progressive cerebellar ataxia, spasticity, inconstant optic atrophy and relatively preserved mental abilities. The disease is chronic-progressive with, in most individuals, additional episodes of rapid deterioration following febrile infections or minor head trauma. While childhood onset is the most common form of the disorder, some severe forms are apparent at birth. A severe, early-onset form seen among the Cree and Chippewayan populations of Quebec and Manitoba is called Cree leukoencephalopathy. Milder forms may not become evident until adolescence or adulthood. Some females with milder forms of the disease who survive to adolescence exhibit ovarian dysfunction. This variant of the disorder is called ovarioleukodystrophy.<ref>PMID:11704758</ref> <ref>PMID:12325082</ref> <ref>PMID:12707859</ref> <ref>PMID:15776425</ref> <ref>PMID:19158808</ref> <ref>PMID:21484434</ref>
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== Function ==
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[https://www.uniprot.org/uniprot/EI2BE_HUMAN EI2BE_HUMAN] Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Viral infection triggers activation of the integrated stress response (ISR). In response to viral double-stranded RNA (dsRNA), RNA-activated protein kinase (PKR) phosphorylates the translation initiation factor eIF2, converting it from a translation initiator into a potent translation inhibitor and this restricts the synthesis of viral proteins. Phosphorylated eIF2 (eIF2-P) inhibits translation by binding to eIF2's dedicated, heterodecameric nucleotide exchange factor eIF2B and conformationally inactivating it. We show that the NSs protein of Sandfly Fever Sicilian virus (SFSV) allows the virus to evade the ISR. Mechanistically, NSs tightly binds to eIF2B (K(D )= 30 nM), blocks eIF2-P binding, and rescues eIF2B GEF activity. Cryo-EM structures demonstrate that SFSV NSs and eIF2-P directly compete, with the primary NSs contacts to eIF2Balpha mediated by five 'aromatic fingers'. NSs binding preserves eIF2B activity by maintaining eIF2B's conformation in its active A-State.
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Viral evasion of the integrated stress response through antagonism of eIF2-P binding to eIF2B.,Schoof M, Wang L, Cogan JZ, Lawrence RE, Boone M, Wuerth JD, Frost A, Walter P Nat Commun. 2021 Dec 7;12(1):7103. doi: 10.1038/s41467-021-26164-4. PMID:34876554<ref>PMID:34876554</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 7rlo" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Z-disk]]
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[[Category: Sandfly fever Sicilian virus]]
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[[Category: Boone M]]
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[[Category: Cogan J]]
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[[Category: Frost M]]
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[[Category: Lawrence R]]
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[[Category: Schoof M]]
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[[Category: Walter P]]
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[[Category: Wang L]]
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[[Category: Wuerth J]]

Current revision

Structure of the human eukaryotic translation initiation factor 2B (eIF2B) in complex with a viral protein NSs

PDB ID 7rlo

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