8tm7

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Current revision (05:03, 12 June 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8tm7 is ON HOLD until Paper Publication
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==Human NAMPT in complex with substrate NAM and small molecule activator NP-A3==
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<StructureSection load='8tm7' size='340' side='right'caption='[[8tm7]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8tm7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8TM7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8TM7 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=I7Q:N-{2-[(4R)-2,2-dimethyl-4-(propan-2-yl)oxan-4-yl]ethyl}-N-[(4-methoxyphenyl)methyl]furan-2-carboxamide'>I7Q</scene>, <scene name='pdbligand=NCA:NICOTINAMIDE'>NCA</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8tm7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8tm7 OCA], [https://pdbe.org/8tm7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8tm7 RCSB], [https://www.ebi.ac.uk/pdbsum/8tm7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8tm7 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Evidence supports boosting nicotinamide adenine dinucleotide (NAD(+)) to counteract oxidative stress in aging and neurodegenerative disease. One approach is to enhance the activity of nicotinamide phosphoribosyltransferase (NAMPT). Novel NAMPT positive allosteric modulators (N-PAMs) were identified. A cocrystal structure confirmed N-PAM binding to the NAMPT rear channel. Early hit-to-lead efforts led to a 1.88-fold maximum increase in the level of NAD(+) in human THP-1 cells. Select N-PAMs were assessed for mitigation of reactive oxygen species (ROS) in HT-22 neuronal cells subject to inflammatory stress using tumor necrosis factor alpha (TNFalpha). N-PAMs that increased NAD(+) more effectively in THP-1 cells attenuated TNFalpha-induced ROS more effectively in HT-22 cells. The most efficacious N-PAM completely attenuated ROS elevation in glutamate-stressed HT-22 cells, a model of neuronal excitotoxicity. This work demonstrates for the first time that N-PAMs are capable of mitigating elevated ROS in neurons stressed with TNFalpha and glutamate and provides support for further N-PAM optimization for treatment of neurodegenerative diseases.
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Authors: Ratia, K.M., Thatcher, G.R.
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Nicotinamide Phosphoribosyltransferase Positive Allosteric Modulators Attenuate Neuronal Oxidative Stress.,Gordon-Blake J, Ratia K, Weidig V, Velma GR, Ackerman-Berrier M, Penton C, Musku SR, Alves ETM, Driver T, Tai L, Thatcher GRJ ACS Med Chem Lett. 2024 Jan 24;15(2):205-214. doi: , 10.1021/acsmedchemlett.3c00391. eCollection 2024 Feb 8. PMID:38352833<ref>PMID:38352833</ref>
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Description: Human NAMPT in complex with substrate NAM and small molecule activator NP-A3
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Ratia, K.M]]
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<div class="pdbe-citations 8tm7" style="background-color:#fffaf0;"></div>
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[[Category: Thatcher, G.R]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Ratia KM]]
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[[Category: Thatcher GR]]

Current revision

Human NAMPT in complex with substrate NAM and small molecule activator NP-A3

PDB ID 8tm7

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