8v1j
From Proteopedia
(Difference between revisions)
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| - | '''Unreleased structure''' | ||
| - | + | ==Structure of an allelic variant of Puccinia graminis f. sp. tritici (Pgt) effector AvrSr27 (AvrSr27-1)== | |
| + | <StructureSection load='8v1j' size='340' side='right'caption='[[8v1j]], [[Resolution|resolution]] 2.42Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[8v1j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Puccinia_graminis_f._sp._tritici Puccinia graminis f. sp. tritici]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8V1J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8V1J FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4159636Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8v1j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8v1j OCA], [https://pdbe.org/8v1j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8v1j RCSB], [https://www.ebi.ac.uk/pdbsum/8v1j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8v1j ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Effector proteins are central to the success of plant pathogens, while immunity in host plants is driven by receptor-mediated recognition of these effectors. Understanding the molecular details of effector-receptor interactions is key for the engineering of novel immune receptors. Here, we experimentally determined the crystal structure of the Puccinia graminis f. sp. tritici (Pgt) effector AvrSr27, which was not accurately predicted using AlphaFold2. We characterised the role of the conserved cysteine residues in AvrSr27 using in vitro biochemical assays and examined Sr27-mediated recognition using transient expression in Nicotiana spp. and wheat protoplasts. The AvrSr27 structure contains a novel beta-strand rich modular fold consisting of two structurally similar domains that bind to Zn(2+) ions. The N-terminal domain of AvrSr27 is sufficient for interaction with Sr27 and triggering cell death. We identified two Pgt proteins structurally related to AvrSr27 but with low sequence identity that can also associate with Sr27, albeit more weakly. Though only the full-length proteins, trigger Sr27-dependent cell death in transient expression systems. Collectively, our findings have important implications for utilising protein prediction platforms for effector proteins, and those embarking on bespoke engineering of immunity receptors as solutions to plant disease. | ||
| - | + | AvrSr27 is a zinc-bound effector with a modular structure important for immune recognition.,Outram MA, Chen J, Broderick S, Li Z, Aditya S, Tasneem N, Arndell T, Blundell C, Ericsson DJ, Figueroa M, Sperschneider J, Dodds PN, Williams SJ New Phytol. 2024 Jul;243(1):314-329. doi: 10.1111/nph.19801. Epub 2024 May 10. PMID:38730532<ref>PMID:38730532</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 8v1j" style="background-color:#fffaf0;"></div> |
| - | [[Category: Ericsson | + | == References == |
| - | [[Category: Outram | + | <references/> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Puccinia graminis f. sp. tritici]] | ||
| + | [[Category: Ericsson DJ]] | ||
| + | [[Category: Outram MA]] | ||
| + | [[Category: Williams SJ]] | ||
Current revision
Structure of an allelic variant of Puccinia graminis f. sp. tritici (Pgt) effector AvrSr27 (AvrSr27-1)
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