8wf5

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Current revision (05:06, 12 June 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8wf5 is ON HOLD until Paper Publication
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==Horse heart myoglobin reconstituted with an iron complex of porphyrin bearing two CF3 groups (rMb(FePor(CF3)2))==
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<StructureSection load='8wf5' size='340' side='right'caption='[[8wf5]], [[Resolution|resolution]] 1.72&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8wf5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Equus_caballus Equus caballus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8WF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8WF5 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.72&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=WC5:PROTOPORPHYRIN(CF3)2+CONTAINING+FE'>WC5</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8wf5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8wf5 OCA], [https://pdbe.org/8wf5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8wf5 RCSB], [https://www.ebi.ac.uk/pdbsum/8wf5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8wf5 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Design of metal cofactor ligands is essential for controlling the reactivity of metalloenzymes. We investigated a carbene transfer reaction catalyzed by myoglobins containing iron porphyrin cofactors with one and two trifluoromethyl groups at peripheral sites (FePorCF3 and FePor(CF3)2, respectively), native heme and iron porphycene (FePc). These four myoglobins show a wide range of Fe(II)/Fe(III) redox potentials in the protein of +147 mV, +87 mV, +42 mV and -198 mV vs NHE, respectively. Myoglobin reconstituted with FePor(CF3)2 has a more positive potential which enhances the reactivity of a carbene intermediate with alkenes and demonstrates superior cyclopropanation of inert alkenes such as aliphatic and internal alkenes. In contrast, engineered myoglobin reconstituted with FePc has a more negative redox potential, which accelerates the formation of the intermediate but has low reactivity for inert alkenes. Mechanistic studies indicate that myoglobin with FePor(CF3)2 generates an undetectable active intermediate with a radical character. In contrast, this reaction catalyzed by myoglobin with FePc includes a detectable iron-carbene species with electrophilic character. This finding highlights the importance of redox-focused design of the iron porphyrinoid cofactor in hemoproteins to tune the reactivity of the carbene transfer reaction.
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Authors: Kagawa, Y., Oohora, K., Himiyama, T., Suzuki, A., Hayashi, T.
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Redox Engineering of Myoglobin by Cofactor Substitution to Enhance Cyclopropanation Reactivity.,Kagawa Y, Oohora K, Himiyama T, Suzuki A, Hayashi T Angew Chem Int Ed Engl. 2024 May 23:e202403485. doi: 10.1002/anie.202403485. PMID:38780472<ref>PMID:38780472</ref>
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Description: Horse heart myoglobin reconstituted with an iron complex of porphyrin bearing two CF3 groups (rMb(FePor(CF3)2))
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Oohora, K]]
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<div class="pdbe-citations 8wf5" style="background-color:#fffaf0;"></div>
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[[Category: Himiyama, T]]
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== References ==
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[[Category: Hayashi, T]]
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<references/>
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[[Category: Kagawa, Y]]
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__TOC__
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[[Category: Suzuki, A]]
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</StructureSection>
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[[Category: Equus caballus]]
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[[Category: Large Structures]]
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[[Category: Hayashi T]]
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[[Category: Himiyama T]]
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[[Category: Kagawa Y]]
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[[Category: Oohora K]]
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[[Category: Suzuki A]]

Current revision

Horse heart myoglobin reconstituted with an iron complex of porphyrin bearing two CF3 groups (rMb(FePor(CF3)2))

PDB ID 8wf5

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