6tey

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Current revision (06:09, 19 June 2024) (edit) (undo)
 
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<StructureSection load='6tey' size='340' side='right'caption='[[6tey]]' scene=''>
<StructureSection load='6tey' size='340' side='right'caption='[[6tey]]' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6tey]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_phage_c-st Clostridium phage c-st]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TEY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TEY FirstGlance]. <br>
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<table><tr><td colspan='2'>Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TEY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TEY FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tey FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tey OCA], [https://pdbe.org/6tey PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tey RCSB], [https://www.ebi.ac.uk/pdbsum/6tey PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tey ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tey FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tey OCA], [https://pdbe.org/6tey PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tey RCSB], [https://www.ebi.ac.uk/pdbsum/6tey PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tey ProSAT]</span></td></tr>
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</table>
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== Function ==
 
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[https://www.uniprot.org/uniprot/TUBR_CBCP TUBR_CBCP] A DNA-binding protein that is part of the type III partition system presumably used to ensure correct segregation of this bacteriophage. Binds to tubC (centromere-like site) DNA upstream of its own gene in a sequence-specific fashion (consensus TTGAC); binds to multiple sites in the tubC region, probably spreading from an initial site (PubMed:22538818, PubMed:29762781). Upon binding to tubC forms flexible loops over about 1 kb of DNA that forms 2 rings, covering tubC and the promoter region. This probably shuts off transcription of the operon. DNA is both bent and untwisted by TubR (PubMed:29762781). The TubR-tubC DNA complex binds to TubZ forming large bundles and decreasing TubZ's GTPase activity (PubMed:22538818).<ref>PMID:22538818</ref> <ref>PMID:29762781</ref>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Clostridium phage c-st]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Canada FJ]]
[[Category: Canada FJ]]

Current revision

Solution Structure of the DNA-binding TubR fragment from Clostridium Botulinum

PDB ID 6tey

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