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| <StructureSection load='7b5j' size='340' side='right'caption='[[7b5j]], [[Resolution|resolution]] 1.34Å' scene=''> | | <StructureSection load='7b5j' size='340' side='right'caption='[[7b5j]], [[Resolution|resolution]] 1.34Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[7b5j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pectobacterium_phage_zf40 Pectobacterium phage zf40]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7B5J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7B5J FirstGlance]. <br> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7B5J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7B5J FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.34Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ZF40_0030, aca2 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1127516 Pectobacterium phage ZF40])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7b5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7b5j OCA], [https://pdbe.org/7b5j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7b5j RCSB], [https://www.ebi.ac.uk/pdbsum/7b5j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7b5j ProSAT]</span></td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7b5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7b5j OCA], [https://pdbe.org/7b5j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7b5j RCSB], [https://www.ebi.ac.uk/pdbsum/7b5j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7b5j ProSAT]</span></td></tr> |
| </table> | | </table> |
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| </StructureSection> | | </StructureSection> |
| [[Category: Large Structures]] | | [[Category: Large Structures]] |
- | [[Category: Pectobacterium phage zf40]]
| + | [[Category: Birkholz N]] |
- | [[Category: Birkholz, N]] | + | [[Category: Blower TR]] |
- | [[Category: Blower, T R]] | + | [[Category: Fineran PC]] |
- | [[Category: Fineran, P C]] | + | [[Category: Usher B]] |
- | [[Category: Usher, B]] | + | |
- | [[Category: Anti-crispr]]
| + | |
- | [[Category: Dna binding protein]]
| + | |
- | [[Category: Dna-binding]]
| + | |
- | [[Category: Regulator]]
| + | |
- | [[Category: Rna binding protein]]
| + | |
- | [[Category: Rna-binding]]
| + | |
| Structural highlights
Publication Abstract from PubMed
Bacteria use adaptive CRISPR-Cas immune mechanisms to protect from invasion by bacteriophages and other mobile genetic elements. In response, bacteriophages and mobile genetic elements have co-evolved anti-CRISPR proteins to inhibit the bacterial defense. We and others have previously shown that anti-CRISPR associated (Aca) proteins can regulate this anti-CRISPR counter-attack. Here, we report the first structure of an Aca protein, the Aca2 DNA-binding transcriptional autorepressor from Pectobacterium carotovorum bacteriophage ZF40, determined to 1.34 A. Aca2 presents a conserved N-terminal helix-turn-helix DNA-binding domain and a previously uncharacterized C-terminal dimerization domain. Dimerization positions the Aca2 recognition helices for insertion into the major grooves of target DNA, supporting its role in regulating anti-CRISPRs. Furthermore, database comparisons identified uncharacterized Aca2 structural homologs in pathogenic bacteria, suggesting that Aca2 represents the first characterized member of a more widespread family of transcriptional regulators.
Crystal structure of the anti-CRISPR repressor Aca2.,Usher B, Birkholz N, Beck IN, Fagerlund RD, Jackson SA, Fineran PC, Blower TR J Struct Biol. 2021 Jun 8;213(3):107752. doi: 10.1016/j.jsb.2021.107752. PMID:34116143[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Usher B, Birkholz N, Beck IN, Fagerlund RD, Jackson SA, Fineran PC, Blower TR. Crystal structure of the anti-CRISPR repressor Aca2. J Struct Biol. 2021 Jun 8;213(3):107752. doi: 10.1016/j.jsb.2021.107752. PMID:34116143 doi:http://dx.doi.org/10.1016/j.jsb.2021.107752
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