8g2j

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Current revision (06:47, 19 June 2024) (edit) (undo)
 
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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[8g2j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_tremula_x_P._tremuloides/Amanita_muscaria_mixed_EST_library Populus tremula x P. tremuloides/Amanita muscaria mixed EST library]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8G2J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8G2J FirstGlance]. <br>
<table><tr><td colspan='2'>[[8g2j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Populus_tremula_x_P._tremuloides/Amanita_muscaria_mixed_EST_library Populus tremula x P. tremuloides/Amanita muscaria mixed EST library]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8G2J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8G2J FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PRD_900016:beta-cellopentaose'>PRD_900016</scene>, <scene name='pdbligand=UPG:URIDINE-5-DIPHOSPHATE-GLUCOSE'>UPG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PRD_900016:beta-cellopentaose'>PRD_900016</scene>, <scene name='pdbligand=UPG:URIDINE-5-DIPHOSPHATE-GLUCOSE'>UPG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8g2j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8g2j OCA], [https://pdbe.org/8g2j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8g2j RCSB], [https://www.ebi.ac.uk/pdbsum/8g2j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8g2j ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8g2j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8g2j OCA], [https://pdbe.org/8g2j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8g2j RCSB], [https://www.ebi.ac.uk/pdbsum/8g2j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8g2j ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[https://www.uniprot.org/uniprot/Q6J8X0_POPPZ Q6J8X0_POPPZ]
[https://www.uniprot.org/uniprot/Q6J8X0_POPPZ Q6J8X0_POPPZ]
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<div style="background-color:#fffaf0;">
 
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== Publication Abstract from PubMed ==
 
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Cellulose is an abundant cell wall component of land plants. It is synthesized from UDP-activated glucose molecules by cellulose synthase, a membrane-integrated processive glycosyltransferase. Cellulose synthase couples the elongation of the cellulose polymer with its translocation across the plasma membrane. Here, we present substrate and product-bound cryogenic electron microscopy structures of the homotrimeric cellulose synthase isoform-8 (CesA8) from hybrid aspen (poplar). UDP-glucose binds to a conserved catalytic pocket adjacent to the entrance to a transmembrane channel. The substrate's glucosyl unit is coordinated by conserved residues of the glycosyltransferase domain and amphipathic interface helices. Site-directed mutagenesis of a conserved gating loop capping the active site reveals its critical function for catalytic activity. Molecular dynamics simulations reveal prolonged interactions of the gating loop with the substrate molecule, particularly across its central conserved region. These transient interactions likely facilitate the proper positioning of the substrate molecule for glycosyl transfer and cellulose translocation. HIGHLIGHTS: Cryo-EM structures of substrate and product bound poplar cellulose synthase provide insights into substrate selectivitySite directed mutagenesis signifies a critical function of the gating loop for catalysisMolecular dynamics simulations support persistent gating loop - substrate interactionsGating loop helps in positioning the substrate molecule to facilitate cellulose elongationConserved cellulose synthesis substrate binding mechanism across the kingdoms.
 
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Insights into substrate coordination and glycosyl transfer of poplar cellulose synthase-8.,Verma P, Kwansa AL, Ho R, Yingling YG, Zimmer J bioRxiv. 2023 Feb 7:2023.02.07.527505. doi: 10.1101/2023.02.07.527505. Preprint. PMID:36798277<ref>PMID:36798277</ref>
 
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
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</div>
 
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<div class="pdbe-citations 8g2j" style="background-color:#fffaf0;"></div>
 
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== References ==
 
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<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>

Current revision

Hybrid aspen cellulose synthase-8 bound to UDP-glucose

PDB ID 8g2j

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