7qwr
From Proteopedia
(Difference between revisions)
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- | ==== | + | ==Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC== |
- | <StructureSection load='7qwr' size='340' side='right'caption='[[7qwr]]' scene=''> | + | <StructureSection load='7qwr' size='340' side='right'caption='[[7qwr]], [[Resolution|resolution]] 2.90Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7qwr]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7QWR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7QWR FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7qwr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7qwr OCA], [https://pdbe.org/7qwr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7qwr RCSB], [https://www.ebi.ac.uk/pdbsum/7qwr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7qwr ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.9Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7qwr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7qwr OCA], [https://pdbe.org/7qwr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7qwr RCSB], [https://www.ebi.ac.uk/pdbsum/7qwr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7qwr ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/RL30_RABIT RL30_RABIT] Component of the large ribosomal subunit (PubMed:27863242). The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell (PubMed:27863242).<ref>PMID:27863242</ref> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The nascent polypeptide-associated complex (NAC) interacts with newly synthesized proteins at the ribosomal tunnel exit and competes with the signal recognition particle (SRP) to prevent mistargeting of cytosolic and mitochondrial polypeptides to the endoplasmic reticulum (ER). How NAC antagonizes SRP and how this is overcome by ER targeting signals are unknown. Here, we found that NAC uses two domains with opposing effects to control SRP access. The core globular domain prevented SRP from binding to signal-less ribosomes, whereas a flexibly attached domain transiently captured SRP to permit scanning of nascent chains. The emergence of an ER-targeting signal destabilized NAC's globular domain and facilitated SRP access to the nascent chain. These findings elucidate how NAC hands over the signal sequence to SRP and imparts specificity of protein localization. | ||
+ | |||
+ | Mechanism of signal sequence handover from NAC to SRP on ribosomes during ER-protein targeting.,Jomaa A, Gamerdinger M, Hsieh HH, Wallisch A, Chandrasekaran V, Ulusoy Z, Scaiola A, Hegde RS, Shan SO, Ban N, Deuerling E Science. 2022 Feb 25;375(6583):839-844. doi: 10.1126/science.abl6459. Epub 2022 , Feb 24. PMID:35201867<ref>PMID:35201867</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 7qwr" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Z | + | [[Category: Oryctolagus cuniculus]] |
+ | [[Category: Ban N]] | ||
+ | [[Category: Chandrasekaran V]] | ||
+ | [[Category: Deuerling E]] | ||
+ | [[Category: Gamerdinger M]] | ||
+ | [[Category: Hegde R]] | ||
+ | [[Category: Hsieh H]] | ||
+ | [[Category: Jomaa A]] | ||
+ | [[Category: Scaiola A]] | ||
+ | [[Category: Shan S]] | ||
+ | [[Category: Ulusoy Z]] | ||
+ | [[Category: Wallisch A]] |
Current revision
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
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Categories: Large Structures | Oryctolagus cuniculus | Ban N | Chandrasekaran V | Deuerling E | Gamerdinger M | Hegde R | Hsieh H | Jomaa A | Scaiola A | Shan S | Ulusoy Z | Wallisch A