1t3f

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[[Image:1t3f.gif|left|200px]]
[[Image:1t3f.gif|left|200px]]
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{{Structure
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|PDB= 1t3f |SIZE=350|CAPTION= <scene name='initialview01'>1t3f</scene>, resolution 2.00&Aring;
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The line below this paragraph, containing "STRUCTURE_1t3f", creates the "Structure Box" on the page.
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|SITE=
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|LIGAND= <scene name='pdbligand=PCA:PYROGLUTAMIC+ACID'>PCA</scene>
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{{STRUCTURE_1t3f| PDB=1t3f | SCENE= }}
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|RELATEDENTRY=[[1t04|1T04]], [[1b2w|1B2W]], [[1b4j|1B4J]]
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t3f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t3f OCA], [http://www.ebi.ac.uk/pdbsum/1t3f PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1t3f RCSB]</span>
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}}
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'''THREE DIMENSIONAL STRUCTURE OF A HUMANIZED ANTI-IFN-GAMMA FAB (HuZAF) IN P21 21 21 SPACE GROUP'''
'''THREE DIMENSIONAL STRUCTURE OF A HUMANIZED ANTI-IFN-GAMMA FAB (HuZAF) IN P21 21 21 SPACE GROUP'''
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==About this Structure==
==About this Structure==
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1T3F is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T3F OCA].
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T3F OCA].
==Reference==
==Reference==
Three-dimensional structures of a humanized anti-IFN-gamma Fab (HuZAF) in two crystal forms., Bourne PC, Terzyan SS, Cloud G, Landolfi NF, Vasquez M, Edmundson AB, Acta Crystallogr D Biol Crystallogr. 2004 Oct;60(Pt 10):1761-9. Epub 2004, Sep 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15388922 15388922]
Three-dimensional structures of a humanized anti-IFN-gamma Fab (HuZAF) in two crystal forms., Bourne PC, Terzyan SS, Cloud G, Landolfi NF, Vasquez M, Edmundson AB, Acta Crystallogr D Biol Crystallogr. 2004 Oct;60(Pt 10):1761-9. Epub 2004, Sep 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15388922 15388922]
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[[Category: Homo sapiens]]
 
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[[Category: Protein complex]]
 
[[Category: Bourne, P C.]]
[[Category: Bourne, P C.]]
[[Category: Cloud, G.]]
[[Category: Cloud, G.]]
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[[Category: Terzyan, S S.]]
[[Category: Terzyan, S S.]]
[[Category: Vasquez, M.]]
[[Category: Vasquez, M.]]
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[[Category: antibody engineering]]
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[[Category: Antibody engineering]]
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[[Category: fab]]
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[[Category: Fab]]
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[[Category: gamma-interferon]]
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[[Category: Gamma-interferon]]
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[[Category: humanized and chimeric antibody]]
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[[Category: Humanized and chimeric antibody]]
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[[Category: immune system]]
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[[Category: Immune system]]
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[[Category: x-ray structure]]
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[[Category: X-ray structure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 09:28:20 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:50:42 2008''
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Revision as of 06:28, 3 May 2008

Template:STRUCTURE 1t3f

THREE DIMENSIONAL STRUCTURE OF A HUMANIZED ANTI-IFN-GAMMA FAB (HuZAF) IN P21 21 21 SPACE GROUP


Overview

Three-dimensional structures were determined for two crystal forms (orthorhombic P2(1)2(1)2(1) and monoclinic C2) of the Fab from the humanized version of a murine monoclonal antibody (AF2) that possesses binding and potent neutralizing activity against human interferon gamma (IFN-gamma). This humanized antibody (HuZAF; USAN name fontolizumab) is currently in phase II clinical trials for the treatment of Crohn's disease. HuZAF exhibits binding and IFN-gamma neutralizing capacities that closely approximate those of the original antibody. It is shown that HuZAF, whose VH domain was designed using a best-sequence-fit approach, is closer structurally to its mouse precursor than is a version whose VH was constructed using a human sequence with lower homology to the original mouse sequence. This work thus offers direct structural evidence in support of the best-sequence-fit approach and adds to previous results of biological and biochemical evaluations of distinctly engineered antibodies that also favored the use of a best-sequence-fit strategy. A second crystal type appeared during attempts to crystallize the Fab-IFN-gamma complex. The antibody-antigen complex that existed in solution dissociated in the crystallization mixture. A conformationally altered but unliganded HuZAF protein crystallized in a different space group (C2), with two Fab molecules in the asymmetric unit. In this crystal lattice, no space was available for accommodating the IFN-gamma antigen. Thus, there are currently three slightly different structures of the HuZAF Fab.

About this Structure

Full crystallographic information is available from OCA.

Reference

Three-dimensional structures of a humanized anti-IFN-gamma Fab (HuZAF) in two crystal forms., Bourne PC, Terzyan SS, Cloud G, Landolfi NF, Vasquez M, Edmundson AB, Acta Crystallogr D Biol Crystallogr. 2004 Oct;60(Pt 10):1761-9. Epub 2004, Sep 23. PMID:15388922 Page seeded by OCA on Sat May 3 09:28:20 2008

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