8v7x

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Current revision (05:37, 4 September 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8v7x is ON HOLD until Paper Publication
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==Cryo-EM structure of TTMV-LY1 anellovirus virus-like particle expressed in HEK293==
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<StructureSection load='8v7x' size='340' side='right'caption='[[8v7x]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8v7x]] is a 60 chain structure with sequence from [https://en.wikipedia.org/wiki/TTV-like_mini_virus TTV-like mini virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8V7X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8V7X FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8v7x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8v7x OCA], [https://pdbe.org/8v7x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8v7x RCSB], [https://www.ebi.ac.uk/pdbsum/8v7x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8v7x ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/M4NKL5_9VIRU M4NKL5_9VIRU] Self-assembles to form an icosahedral capsid.[RuleBase:RU361230]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Anelloviruses are nonpathogenic viruses that comprise a major portion of the human virome. Despite being ubiquitous in the human population, anelloviruses (ANVs) remain poorly understood. Basic features of the virus, such as the identity of its capsid protein and the structure of the viral particle, have been unclear until now. Here, we use cryogenic electron microscopy to describe the first structure of an ANV-like particle. The particle, formed by 60 jelly roll domain-containing ANV capsid proteins, forms an icosahedral particle core from which spike domains extend to form a salient part of the particle surface. The spike domains come together around the 5-fold symmetry axis to form crown-like features. The base of the spike domain, the P1 subdomain, shares some sequence conservation between ANV strains while a hypervariable region, forming the P2 subdomain, is at the spike domain apex. We propose that this structure renders the particle less susceptible to antibody neutralization by hiding vulnerable conserved domains while exposing highly diverse epitopes as immunological decoys, thereby contributing to the immune evasion properties of anelloviruses. These results shed light on the structure of anelloviruses and provide a framework to understand their interactions with the immune system.
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Authors:
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Structure of anellovirus-like particles reveal a mechanism for immune evasion.,Liou SH, Boggavarapu R, Cohen NR, Zhang Y, Sharma I, Zeheb L, Mukund Acharekar N, Rodgers HD, Islam S, Pitts J, Arze C, Swaminathan H, Yozwiak N, Ong T, Hajjar RJ, Chang Y, Swanson KA, Delagrave S Nat Commun. 2024 Aug 22;15(1):7219. doi: 10.1038/s41467-024-51064-8. PMID:39174507<ref>PMID:39174507</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 8v7x" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: TTV-like mini virus]]
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[[Category: Rajendra B]]
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[[Category: Swanson K]]

Current revision

Cryo-EM structure of TTMV-LY1 anellovirus virus-like particle expressed in HEK293

PDB ID 8v7x

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