2ffi

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:37, 9 October 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2ffi' size='340' side='right'caption='[[2ffi]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
<StructureSection load='2ffi' size='340' side='right'caption='[[2ffi]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2ffi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Psepk Psepk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FFI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2ffi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida_KT2440 Pseudomonas putida KT2440]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FFI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FFI FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.61&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PP1699 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160488 PSEPK])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ffi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffi OCA], [https://pdbe.org/2ffi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ffi RCSB], [https://www.ebi.ac.uk/pdbsum/2ffi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffi ProSAT], [https://www.topsan.org/Proteins/NESGC/2ffi TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ffi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ffi OCA], [https://pdbe.org/2ffi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ffi RCSB], [https://www.ebi.ac.uk/pdbsum/2ffi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ffi ProSAT], [https://www.topsan.org/Proteins/NESGC/2ffi TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q88M75_PSEPK Q88M75_PSEPK]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffi_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ff/2ffi_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 22: Line 23:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Psepk]]
+
[[Category: Pseudomonas putida KT2440]]
-
[[Category: Acton, T B]]
+
[[Category: Acton TB]]
-
[[Category: Conover, K]]
+
[[Category: Conover K]]
-
[[Category: Forouhar, F]]
+
[[Category: Forouhar F]]
-
[[Category: Hunt, J F]]
+
[[Category: Hunt JF]]
-
[[Category: Jayaraman, S]]
+
[[Category: Jayaraman S]]
-
[[Category: Montelione, G T]]
+
[[Category: Montelione GT]]
-
[[Category: Structural genomic]]
+
[[Category: Su M]]
-
[[Category: Su, M]]
+
[[Category: Tong L]]
-
[[Category: Tong, L]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R]]
+
-
[[Category: Nesg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Tim-barrel protein]]
+
-
[[Category: Unknown function]]
+

Current revision

Crystal Structure of Putative 2-Pyrone-4,6-Dicarboxylic Acid Hydrolase from Pseudomonas putida, Northeast Structural Genomics Target PpR23.

PDB ID 2ffi

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools